Gene Information

Name : nanE (CLDAP_03080)
Accession : YP_005440245.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Virulence
Product : putative N-acetylmannosamine-6-phosphate 2-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 410128 - 410796 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
GTGAAAGGGCGCCTGATCGTCTCCTGCCAGGCGTTGCCGCACGAACCACTCTACGGCGCCGACATCATGGCGCGCATGGC
GCTGGCAGCCGCCCAGGGCGGCGCTGCCGCAATCCGCGCCAACACGCCCGCCGACATTCGCGCCATTCGAGCCATCGTCT
CGCTGCCGATCATCGGCCTGTATAAAGCAGAACTTCCTGGTTTTGAGGTGTACATTACGCCCACCCTGGCGCATGCGTGC
GAAATTGCCGAAGCGGGAGCTGACGTCATCGCCATCGATGCCACGGCGCGGCCGCGACCCGAATTCGCCGACCTGACCTC
CTTCATCGCTGCCATCCATCAGGCAACCGGTCTGCCGGTGCTCGCCGACATCTCAACTTTGGAAGAAGGCATTGCTGCCG
AAGCGGCGGGCGCGGATTTCGTGGCGACGACGCTTTCTGGCTACACCCCTTACAGCCCGCAGCGGGATGGCCCAGATATT
GAGCTGGTCGGTGCATTGAGCCATGCGCTGACAACGCCTGTGATCGCCGAAGGCCGCTATCACACGCCGGAACAGGTGAC
CGCTGCGCTGAAGGCCGGGGCTGTGAGCGTCGTCGTGGGAGGGGCCATTACTCGACCGCAGGAGATCACGCAAAGATTCG
TGAAGGCGATTGAAAAAATTCAAAACTGA

Protein sequence : 
MKGRLIVSCQALPHEPLYGADIMARMALAAAQGGAAAIRANTPADIRAIRAIVSLPIIGLYKAELPGFEVYITPTLAHAC
EIAEAGADVIAIDATARPRPEFADLTSFIAAIHQATGLPVLADISTLEEGIAAEAAGADFVATTLSGYTPYSPQRDGPDI
ELVGALSHALTTPVIAEGRYHTPEQVTAALKAGAVSVVVGGAITRPQEITQRFVKAIEKIQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0540 NP_814312.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested Not named Protein 2e-24 48
ef0066 AAM75271.1 EF0066 Not tested Not named Protein 2e-21 47
nanE ACA01846.1 N-acetylmannosamine-6-phosphate epimerase Not tested VPI-2 Protein 1e-10 42
VC1781 NP_231416.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested VPI-2 Protein 9e-11 42
VC0395_A1378 YP_001217321.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested VPI-2 Protein 9e-11 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nanE YP_005440245.1 putative N-acetylmannosamine-6-phosphate 2-epimerase VFG1114 Protein 3e-11 42