Gene Information

Name : smpB (CLDAP_30690)
Accession : YP_005443006.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3817365 - 3817844 bp
Length : 480 bp
Strand : +
Note : -

DNA sequence :
GTGGCGAAAGTCAAGGAAGCAGCACACGGGCCGCGCACCGTGGCCACCAACCGCAAGGCGCGGCATGAATATTTCATCGA
GGAGACCTACGAAGCAGGCATTGTCCTGACAGGCACTGAAATCAAGTCGGTGCGCGCCGGCAAAGTCAGCTTGCAGGAAG
GCTTCGTGCTGATCAAAAACGGCGAGGCATGGCTGATCAACGTACACATTGCCCAGTACGAGCAGGGCAATCGCTTCAAC
CATGAGGAGCGCCGCGACCGCAAGCTGTTGTTGAAGCGGCGAGAGATTCAGGAGCTTTACGGCGCAGCGACGCGACGCGG
CTATACGATCGTGCCGCTGCGCATGTACATCAACGAGCGCGGCCTCGCCAAGGTCGAGATCGGTCTGGCGCGCGGCAAGC
AGCTTCACGACAAGCGCGAAACGATCGCGAAACGCGAAAGCGAGCGCAACCTGCGACGGATGTTGAAGGGTGAGTGGTGA

Protein sequence :
MAKVKEAAHGPRTVATNRKARHEYFIEETYEAGIVLTGTEIKSVRAGKVSLQEGFVLIKNGEAWLINVHIAQYEQGNRFN
HEERRDRKLLLKRREIQELYGAATRRGYTIVPLRMYINERGLAKVEIGLARGKQLHDKRETIAKRESERNLRRMLKGEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-24 54
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-23 52
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 6e-20 44