Gene Information

Name : CLDAP_26540 (CLDAP_26540)
Accession : YP_005442591.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3305669 - 3306331 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence : 
GTGGAAACGATCGACCTGGAACGCATCTATCGCCGCGACCATCAGACGGTGCGGGCGCTCGGCGGGGTGACGCTCACCGT
TCAGGCCGGTCAATTCGTCGCCGTCAAAGGTCGCTCCGGCAGCGGCAAGACGACGTTGCTCAACTGCATCGGCGGGCTGG
ACCAGCCGACAGCGGGCAACGTGCGCGTCTTTGGCAATGAAATTAGCTCCTGGTCAGAACGCCGGCGCACGGCATGGAGA
AAGCAGGAGATTGGCTTTATTTTTCAATCGTTGGGGCTGTTGCCCATCCTGTCAGCATATGAAAATGTGGAGCTTGCACT
CAGGCTCAAAGGCGTCTCCGCCGCTGAACGACGGAAGGCAACGCTGGAGGCGCTGGAAATGGTTGGCCTTCTTAAATGGA
AGGATCATCGTCCTTATGAGCTTTCCGGCGGTCAACAGCAGCGTGTGGCAATCGCACGCGCCCTGGCACACTCCCCCCGG
CTATTGATCGCCGATGAACCTACCGCCAATCTGGACTCCAAAACGGCGCACAACGTGCTTGCCCTTTTTCGCACCCTCGT
GAACGAGCGCCACATCACGCTGCTCATGGCCACCCATGACGTGCTGGCTGACGCGTACGCAGACCGTGTGCTCTACCTCA
GCGATGGCCGTCTTCTCTCCTGA

Protein sequence : 
METIDLERIYRRDHQTVRALGGVTLTVQAGQFVAVKGRSGSGKTTLLNCIGGLDQPTAGNVRVFGNEISSWSERRRTAWR
KQEIGFIFQSLGLLPILSAYENVELALRLKGVSAAERRKATLEALEMVGLLKWKDHRPYELSGGQQQRVAIARALAHSPR
LLIADEPTANLDSKTAHNVLALFRTLVNERHITLLMATHDVLADAYADRVLYLSDGRLLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLDAP_26540 YP_005442591.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-32 47
CLDAP_26540 YP_005442591.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-39 46
CLDAP_26540 YP_005442591.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-36 43
CLDAP_26540 YP_005442591.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLDAP_26540 YP_005442591.1 putative ABC transporter ATP-binding protein VFG2059 Protein 1e-16 42