Gene Information

Name : tkt (CLDAP_21300)
Accession : YP_005442067.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2665585 - 2667645 bp
Length : 2061 bp
Strand : +
Note : -

DNA sequence :
ATGGATACTGTAACCGTTCCCTCGCTGGACAAACCGTTGAGCCGTGAATTTGAAATCAAAGCCGCCAATACGATTCGGAT
GCTGGCCGCAGATGCTGTGCAGGCTGCCAATTCCGGACATCCTGGCATGCCGATGGGCATGGCTGTGGCTGCGTTGACGC
TCTGGACGCGGGTGATGCGTTACAACCCGCGCAATCCGCACTGGTTCGACCGCGACCGCTTCGTGCTGAGCGCAGGGCAC
GGGTCGATGCTGCTCTATGCCATGTTGCACCTGACCGGCTACGACCTGCCGCTGGAGGAGCTGAAAAACTTCCGTCAGTG
GGGCAGCAAAACGCCGGGACATCCCGAAGCGCGTCACACCCCTGGCGTTGAGACAACGACCGGGCCGCTCGGGCAGGGCT
TTGCCAACGGCGTCGGCATGGCGATTGCCGAGCGCTGGCTGGCGCAGCGTTTCAATCGGCCTGGTTTTGATGTGATCAAC
CATTACACCTATGCCATCGTATCCGATGGCGATCTCATGGAGGGTGTCGCCAGCGAAGCTGCCAGCCTGGCCGGCCATCT
CCGGCTGGGCAAGCTCATTTATCTCTACGACGACAACTCGGTCACCATCGATGGCAAGACCGAGATCACATACACAGAGG
ACTGGGCCAAACGCTTCGAGGCCTATGGCTGGCATGTACAGCGCGATGTGGAGTTCACTAACAGCGCCGCAATTTACGAC
GCAATTATCACCGCGCAAAACGATCCGCGGCCCAGCATCATCGGTCTCAAGAGCATCATCGGCTACGGCAGCCCGAATAA
GGCGGGCACATCCAAGGTCCATGGCGAGCCGTTGGGTGAAGAGGAATTGAAGGCCACGAAAGAGAACCTTGGCTGGCCGC
TCGAGCCGCGCTTCTACATTCCAGAAGACGTGCTGGCCTATTTCCGGCAGGCGGTCGAGCGCGGCCGTATGCTTGAGGAC
GCGCATCAGCAGTTGATGGCTGCCTACGCCGACGCCTATCCCGATCTGGCTGCCGAGCTGCAGCGCTTCATCCGCGGGGA
GTTGCCGGAGGGTTGGGAGGAGGTGCTGCCTGTCTTTCCTCCATCGGCTAAAGGCGACGCCACGCGCAACAGCAGCGGCA
AGGTGATCAACGCGCTGGCCCCTGTGCTGCCCAACCTGATCGGCGGCAGCGCTGACCTTGCCGCCAGCAACAAGACCACC
ATCAGCGGCGCCCCCTTCATGAAACCCGGCGATTTCGGCGGCCCGAACATTCATTTTGGCGTGCGCGAGCACGGTATGGG
CGGCATTCTCAACGGCATGGCGCTACATGGCGGTGTGTTGCCGTTCGGCGGCACCTTCCTGGTTTTCAGCGACTACATGC
GCGGCGCAATTCGCCTTGCTGCGTTGAGCGGCCTGCGAGTCATCTATGTCTTCACCCACGACAGCATTGGCCTGGGCGAA
GATGGTCCTACGCATCAGCCCATCGAGCATCTTGCTGCGCTGCGAGCGATGCCAAACCTGACCGTCATCCGCCCTGCCGA
TGCCAACGAGACCAGCCAGGCATGGCGCGCTGCCCTCCTGAACGCCAATGGCCCAACTGCCCTGGCCCTGACGCGACAAA
ACGTGCCGATCTATGACCGGGAAGGCGAAGGATTGGGTGCCGCTGAGGAGCTTTTGAAAGGCGGCTATGTCTTCTACGAG
CATGCGCCCAATGGTCTGCAGGTGGTGTTGATCGGCACAGGCAGCGAGGTCCAGATTGCCTATGATGCCGCCAGACAACT
GGCTGCCGAGGGCGTCGGCGTGCGCGTGGTGAGCCTGCCGAGCTGGGAGCTCTTCCAGGCGCAGCCCGCCGACTACCGGG
CTGCGGTGCTGCCCCCTGATCTACCCAAGGTCGCCATTGAGGCGGCTGCCACCTTCGGTTGGGAGCGCTGGGTAGGCAAC
GACCCGCGCAAGGGTGTCATCATCGGCGTCGATCGCTTTGGCGCCAGCGCGCCGTATCAGCGCATTTATAAGGAGTTTGG
CCTTACGGTCGAGCGAGTCGTGGACGTTGCCAGGCGGCTCATCAACGGACAAGGTCAATAA

Protein sequence :
MDTVTVPSLDKPLSREFEIKAANTIRMLAADAVQAANSGHPGMPMGMAVAALTLWTRVMRYNPRNPHWFDRDRFVLSAGH
GSMLLYAMLHLTGYDLPLEELKNFRQWGSKTPGHPEARHTPGVETTTGPLGQGFANGVGMAIAERWLAQRFNRPGFDVIN
HYTYAIVSDGDLMEGVASEAASLAGHLRLGKLIYLYDDNSVTIDGKTEITYTEDWAKRFEAYGWHVQRDVEFTNSAAIYD
AIITAQNDPRPSIIGLKSIIGYGSPNKAGTSKVHGEPLGEEELKATKENLGWPLEPRFYIPEDVLAYFRQAVERGRMLED
AHQQLMAAYADAYPDLAAELQRFIRGELPEGWEEVLPVFPPSAKGDATRNSSGKVINALAPVLPNLIGGSADLAASNKTT
ISGAPFMKPGDFGGPNIHFGVREHGMGGILNGMALHGGVLPFGGTFLVFSDYMRGAIRLAALSGLRVIYVFTHDSIGLGE
DGPTHQPIEHLAALRAMPNLTVIRPADANETSQAWRAALLNANGPTALALTRQNVPIYDREGEGLGAAEELLKGGYVFYE
HAPNGLQVVLIGTGSEVQIAYDAARQLAAEGVGVRVVSLPSWELFQAQPADYRAAVLPPDLPKVAIEAAATFGWERWVGN
DPRKGVIIGVDRFGASAPYQRIYKEFGLTVERVVDVARRLINGQGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 5e-136 52
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 1e-132 48