Gene Information

Name : CLDAP_21250 (CLDAP_21250)
Accession : YP_005442062.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2660345 - 2661334 bp
Length : 990 bp
Strand : +
Note : -

DNA sequence : 
ATGGATTCGCTTCCCCAAACCTCACCCAAACCGACCGGGAAAAAGCTCCTCGATGTGGTGCGGGATACGATCCGCCGCAA
ACACTACTCCATCCGCACCGAGGAGGCCTACGTCAACTGGATCAGGCGCTTCATCCTCTTCCACGGTAAACGCCATCCCA
AAGACATGGGCGCAGCCGAGGTCGAGGCGTTCCTGACCCATCTCGCCACCGAAGGCCACGTCTCGGCCTCCACCCAAAAC
CAGGCTTTCAGTGCGCTGCTGTTTCTGTATCGCGAGGTGCTGCATCGCGAACTCGACGCCCCCGTCCACGCCCTGCGCGC
GAAAGAGTCGCGCCACATCCCTGCAGTGCTGACCAGAGAGGAGGTGCGTCAGGTCATTGCGCAGCTTTCCGGCGTCTACC
AGCTCCAGGCCAGGCTCCTCTACGGCAGCGGCCTGCGCCTGCTGGAATGCCTGCGCCTGCGTGTCAAGGATATTGACTTC
CAGCGCCGCGCCATCACCGTCCGGGACACCAAGGGGAATGAGGATCGGATCACGATGCTGCCCGATAGTGTGATCGAACC
GCTCAAAGAGCACTTGCAGCGGGTCAGGCGCCTGCACGAGGAGGACTTGGCCAAAGGCTATGGTAGCGTCTATCTACCTG
ACGCGCTGGACCGCAAGTATCCTAACGCCAGCCGCGAGTGGATCTGGCAATACGTCTTCCCGTCCGACCGCCTTTCCACC
GACCCGCGTTCGGGCGTCGTGCGGCGCCACCATCTGGATGCAAGCGGCTTGCAAAAGGCCGTTCGCGCTGCTGCTCGTGC
CGCAGGGATCAACAAACGCGTCACCTGCCATACCTTCCGTCATTCATTCGCCACCCACCTGCTCGAAAACGGCTACGACA
TCCGCACCGTCCAGGAACTGTTGGGCCACAAAAACGTCAAGACGACCATGATCTACACCCACGTGCTCCAGCGCGGCGGC
CTGGCCGTCCGCAGCCCGCTCGACTGTTGA

Protein sequence : 
MDSLPQTSPKPTGKKLLDVVRDTIRRKHYSIRTEEAYVNWIRRFILFHGKRHPKDMGAAEVEAFLTHLATEGHVSASTQN
QAFSALLFLYREVLHRELDAPVHALRAKESRHIPAVLTREEVRQVIAQLSGVYQLQARLLYGSGLRLLECLRLRVKDIDF
QRRAITVRDTKGNEDRITMLPDSVIEPLKEHLQRVRRLHEEDLAKGYGSVYLPDALDRKYPNASREWIWQYVFPSDRLST
DPRSGVVRRHHLDASGLQKAVRAAARAAGINKRVTCHTFRHSFATHLLENGYDIRTVQELLGHKNVKTTMIYTHVLQRGG
LAVRSPLDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intI CAJ77082.1 Integrase Not tested AbaR1 Protein 1e-75 54
intI1 YP_005797130.1 integrase Not tested AbaR4e Protein 2e-75 54
intI1 AGF35060.1 IntI1 integrase Not tested SGI1 Protein 1e-75 54
intI1 YP_005797145.1 integrase Not tested AbaR4e Protein 2e-75 54
intI1 AGK06930.1 IntI1 integrase Not tested SGI1 Protein 1e-75 54
intI1 ACN81019.1 IntI1 integrase Not tested AbaR5 Protein 2e-75 54
intI1 AGK06967.1 IntI1 integrase Not tested SGI1 Protein 1e-75 54
intI1 AGK07013.1 IntI1 integrase Not tested SGI1 Protein 1e-75 54
intI1 AGK07071.1 IntI1 integrase Not tested SGI1 Protein 1e-75 54
intI1 AFV53119.1 IntI1 integrase Not tested AbGRI2-1 Protein 1e-75 54
intI1 AGK36642.1 IntI1 integrase Not tested AbaR26 Protein 1e-75 54
intI1 ABB48427.1 IntI1 integrase Not tested SGI1 Protein 1e-75 54
intI YP_001844881.1 integrase Not tested AbaR20 Protein 2e-75 54
intI1 AFL65913.1 class 1 integrase Not tested SGI1-J6 Protein 1e-55 54
int1 YP_005160012.1 integrase Not tested Not named Protein 5e-61 54
intI1 ACY75535.1 integrase Not tested Tn6060 Protein 9e-75 53
intI1 AGF34986.1 IntI1 integrase Not tested SGI1 Protein 9e-75 53
intI1 AGF35026.1 IntI1 integrase Not tested SGI1 Protein 9e-75 53
intI1 CAB46685.1 DNA integrase Not tested Not named Protein 9e-75 53
unnamed AAL08437.1 Tn21 integrase IntI1 Not tested SRL Protein 3e-75 53
intI1 AAK02045.1 integrase Not tested SGI1 Protein 9e-75 53
unnamed ACF06155.1 class 1 integrase Not tested Tn5036-like Protein 2e-75 53
intI1 ABZ01842.1 IntI1 Not tested SGI2 Protein 9e-75 53
intI1 AGK07098.1 IntI1 integrase Not tested SGI1 Protein 2e-75 53
intI CAJ77028.1 Integrase Not tested AbaR1 Protein 9e-75 53
EC042_4092 YP_006098375.1 integrase Not tested Tn2411 Protein 3e-75 53
intI1 ACY75520.1 integrase Not tested Tn6060 Protein 9e-75 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLDAP_21250 YP_005442062.1 putative transposase VFG1028 Protein 2e-75 53