Gene Information

Name : CLDAP_20700 (CLDAP_20700)
Accession : YP_005442007.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2587527 - 2588342 bp
Length : 816 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGGTTTGGAAGCCCTTCACGTTACCAAAATCTATGGCACAGGCGCCACTGCTGTTACCGCTGTGAACGATGTTTC
GCTCAGCGTGCGCAGAGGAGAATTCGTCGCCCTGGTCGGGCCAAGCGGTTCCGGCAAGACCACGATGCTGGCGATGTTGG
CCGGCCTGTTGAAGCCGAGCGAAGGGCAAATTTTTATCGCCGGCCAGGACATTGGCCGCATGAGTGAAGCGGAGCGCACG
CGTTTCCGTGGCCGCTACATTGGCTTTGCCTTTCAATCCAATAATCTGGTTCCCTATCTGACCGCTCTGGAGAATGTGGA
GCTGATGCTGCGGCTCAACGGCAAGTTCGATCGCAAAGGACGGGAGCGGGCGCGTGAGCTGCTTGTCCGGCTTGGCCTGG
CCGAGCGGTTGAACAATCGCCCCAATCAGCTTTCCGGCGGTCAACAGCAGCGCGTTGCCATCGCCCGTGCCCTGATCCAT
GAGCCGGAGGTCGTGCTTGCCGATGAGCCTACCGCCAGCCTCGACACTGAACGCGCGCATCAGGTTGTGCAGACGTTTGC
CGAGTTAATTCACGAACAAAACCGCGCCGGCATCATGGTGACGCATGATCTGCGCATGTGCAGATATGTGGATCGCGTCA
TTCAGATGGTGGACGGCAAAGTGAGCCGAGAAATCGCTGATCGAAACGACATTTTGCGACTGGCCGGCGCGCTCGACTCG
ATGAACGGCGTTGGCGAATCCTCCTGGGCGATGGAGGCCAACGGTGAGCACAGCCTCTCCTCCAGCAAGCATAGCATGTC
GCCAGCGATTCTTTAG

Protein sequence : 
MIGLEALHVTKIYGTGATAVTAVNDVSLSVRRGEFVALVGPSGSGKTTMLAMLAGLLKPSEGQIFIAGQDIGRMSEAERT
RFRGRYIGFAFQSNNLVPYLTALENVELMLRLNGKFDRKGRERARELLVRLGLAERLNNRPNQLSGGQQQRVAIARALIH
EPEVVLADEPTASLDTERAHQVVQTFAELIHEQNRAGIMVTHDLRMCRYVDRVIQMVDGKVSREIADRNDILRLAGALDS
MNGVGESSWAMEANGEHSLSSSKHSMSPAIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 7e-36 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLDAP_20700 YP_005442007.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-38 45
CLDAP_20700 YP_005442007.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-28 42
CLDAP_20700 YP_005442007.1 putative ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-32 42
CLDAP_20700 YP_005442007.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-36 41