Gene Information

Name : glnA (CLDAP_19730)
Accession : YP_005441910.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2474199 - 2475614 bp
Length : 1416 bp
Strand : -
Note : -

DNA sequence :
ATGAGCTTGAATTGTCTTACGCCTCAGGATGTTACCCGCGCCATTGAAGAAAATCACATTGAATTTATCGATTTGAAATT
CACCGACCTGTTTGGTCAGTGGCATCACTTTTCCGTACCGGTCGATTATTACGACGAAGAGGACCTCTTCAAGAGCGGCC
TGGGGTTCGACGGCTCATCGATCCGCGGCTTCAAATCGATCGAAAGCAGCGATATGCTGCTCGTATGCGACCCAACGACA
GCGTTTGTTGATCCTGTCTGCGCGCATCCGACGATCAGCGTCATCGCCAATGTGTATGAGCCGGGCACGATGGAGCCCTT
CAGCCGCGATCCGCGCAATGTCATCCGCCGCGCCGAGGCTTACATGAAGGAGACAGGCATCGCTGACACGATGTACTGTG
GGCCGGAGGCGGAGTTTTTCATCTTCGACCGCGTGCACTATGAGACTGGTCGCTACTTCGCCAGCTACGGCATTGCGAGC
GATGAGGCGGTGTGGACCTCAGGCGAGTGGGGGCCAGGCCACAAGGTCAACTTCAAGGGCGGCTATTTCCCGGTGGCGCC
TTTCGACCAATTCCAGGACATTCGCTCTGAAATGGTCAACGAAATGATCAAGGCAGGGCTCAAGATTGAGCGCCATCACC
ACGAAGTTGCCACAGCCGGCCAGACGGAGATCGACCTGAAATTTGCGCCGATGGTTCAGATGGCGGACTGGATGCAGATT
TACAAATACATCGTGAAGAATGTGGCAGCGCGGCACGGCAAAACGGCCACTTTCATGCCCAAGCCGCTCTTCGAGGATAA
CGGCTCCGGCATGCACGTGCATCAAAGCCTCTGGAAGGATGGGCAGCCGCTCTTCGCCGGCGATCGCTATGCAGGCCTGA
GCCAGCTGGCGCTCTGGTACATCGGCGGCATTCTCCATCATATCAACTCGCTGCTCGCGTTCTGTGCGCCGACGACCAAC
AGCTATCGTCGTTTGGTGCCGGGCTATGAGGCGCCTGTGGTGATCGCCTACTCCGCCCGCAACCGCTCGGCGGCCTGCCG
CATTCCGGTCTCTTCGCCGTCGCCCAAAGCCAAGCGCGTCGAGTTTCGTTGCCCGGACCCGGCGGCGAATCCGTACCTGG
CGTTCGCAGCGATGCTGATGGCAGGGCTGGACGGCATCCGCAATCAGATCGATCCGGGTAAGCCGTCCGAGATAGACTTA
TTTGAGGGCGAGACGCTCAAGAAAGTGCGCACGGTAGAGGGTTCGCTTGACAAAGTGCTGGATGCCTTGGAGGCAGACCA
TGACTATCTGACCGCTGGCGGCGTCTTCAGCGAACAACTGCTCGAAACATACATCAGCTACAAGCGGCTGAACGAGTTTG
ACGCCGTGCGTCTACGCCCCCATCCACACGAATTTGTCATGTACTACGGTGTGTGA

Protein sequence :
MSLNCLTPQDVTRAIEENHIEFIDLKFTDLFGQWHHFSVPVDYYDEEDLFKSGLGFDGSSIRGFKSIESSDMLLVCDPTT
AFVDPVCAHPTISVIANVYEPGTMEPFSRDPRNVIRRAEAYMKETGIADTMYCGPEAEFFIFDRVHYETGRYFASYGIAS
DEAVWTSGEWGPGHKVNFKGGYFPVAPFDQFQDIRSEMVNEMIKAGLKIERHHHEVATAGQTEIDLKFAPMVQMADWMQI
YKYIVKNVAARHGKTATFMPKPLFEDNGSGMHVHQSLWKDGQPLFAGDRYAGLSQLALWYIGGILHHINSLLAFCAPTTN
SYRRLVPGYEAPVVIAYSARNRSAACRIPVSSPSPKAKRVEFRCPDPAANPYLAFAAMLMAGLDGIRNQIDPGKPSEIDL
FEGETLKKVRTVEGSLDKVLDALEADHDYLTAGGVFSEQLLETYISYKRLNEFDAVRLRPHPHEFVMYYGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-86 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_005441910.1 glutamine synthetase VFG1399 Protein 4e-118 54