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Name : clpC (CLDAP_19360) Accession : YP_005441873.1 Strain : Caldilinea aerophila DSM 14535 Genome accession: NC_017079 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 2420468 - 2422990 bp Length : 2523 bp Strand : + Note : - DNA sequence : ATGTCTGACAAATTAGATCGCTTTACCAAGCGAGCGCGCCGCGTACTGACGCTGGCGCAGGAAGAAGCGCTCCGGCTGAA TCACAACTACATAGGCACAGAGCATCTCCTCCTCGGATTGGTGCGAGAGGAGAACGGCGTAGCGGTGAAGGTACTGCGTG AGCTGGGCGTTGAGCCGGTTCAAATCATCCGCGCCGTCGAACGCACGGTTGGACGGGGTGAGCGGCCGCCCTTTGGCAAG CCAACCCTGGCCCCGCGCACCAAGCGCGTCATCGAGCTGGCGGTGGATGAGGCACGCCTGATGGGTCATCACTACATCGG CACCGAACATCTGCTGCTCGGTCTGGTGCGTGAAGGCGAGGGGATCGCAGTCAATGTATTGCGCGGGCTTGGCATCAACC TGGACCGCGTGCGCACGCAGACAGCGCGCAACATTCTGCAGAGCCAGGCGCAGACCAAAGACAAGCAGAAGAAAGAATCG AAGACGCCGCTCATGGATCAGCTTGGCTATGACCTGACGGCGGCTGCCGAGGAAGGCAAGCTCGACCCGGTCATCGGCCG CGAAGCCGAGATCGAACGAGTGATCCAGATCCTGAGCCGACGTACCAAGAACAACCCTGCTCTCATCGGCGAGCCGGGCG TGGGCAAGACCGCCATCGTTGAAGGGTTGGCGCAGCGCATCGTGGAGGGCAACGTGCCCGAACCCCTGCTCAACAAACGC TTGCTGATGCTGGACGTCGGCAGCCTGGTTGCTGGCACCATGTATCGCGGCCAGTTCGAAGAGCGCCTCAAAAAGGTGAT TGAAGAGGTCATCAACTCACAGTCGATCCTCTTCATCGATGAGGTGCACATGCTGGTTGGCGCAGGTGCAGCAGGCAGCA GCGTAGATGCCGCCAACATCTTGAAACCTGCGCTCAGCCGCGGCGAGTTACAGGTGATCGGCGCCACCACGCTCGACGAA TACCGCAAATACATCGAGAGCGATGCAGCGCTTGAACGGCGCTTCCAGCCGATCCTGGTGGAGGAGCCTTCGATCGAACA AACGATCGAAATCCTGCGCGGGGTCCGGCCTCGCTATGAAGAGCATCACAAACTCATCATCACCGATGAGGCACTGCACG CCGCCGCCCACCTGGCTGCGCGTTACGTGCCCGATCGATTCATGCCCGACAAAGCGATCGATCTGATCGACGAAGCGGGC AGTCGCGTGCGCATGTACAAAGCGCCCTACGCCGCCAATCTGCGCGAGACGTTCATGAGCCTGAAAAAGCTGCAGAAAGA AAAAGAGCAGGCGCTTGACATGCAACGCTTCGACGACGCCATTGACCTGCGCTATCGGGAAGTGGAGCTGGAAGCGCGAC TGAGCGAGCTACGCGAAAGCTGGAACGAAGCCGCCAATCAGCCCAAAGTCACAGCCGAGGATATCGCCGAGGTGGTTTCG ATGTGGACGGGCGTTCCGGTCAGCCGCATCGCCGGTGAGGAGCGCGAGCGCCTGTTAGACATGGAACGCGTGATGCACCA GCGTATCATCGGCCAGGATGAACCGATCAAGGCGATCGCCAAGGCCGTGCGCCGTGCACGCGCCGGCTTGAAAGATCCCA AGCGGCCGATCGGTAGCTTCATGTTCCTGGGCCCAACCGGCATCGGCAAGACGTTGCTCGCTAAGACGTTGGCGGAATTC CTCTTCGGCAGCGAAGAGGCCCTGATCAAGCTCGATATGAGCGAATTCATGGAGCGCCACAACGTCAGCCGCCTGGTCGG TGCGCCGCCTGGATACGTCGGCTACGAAGAAGGCGGTCAGCTCACGGAAGCGGTACGGCGTCGCCCCTACAGCGTGGTGC TGCTCGACGAAATCGAAAAGGCGCATCCAGAGGCATTCAACATGCTGCTCCAGATCATGGAAGATGGCTATCTCACCGAC GCCAAAGGACGCCGCGTCGACTTCCGCAACACGCTGATTTTGATGACCAGTAACATCGGCGCCAAGCTGATCCAGGGCGC CAAGGGGCTTGGCTTCGTCATCTCGCAGGACGAAGACGAGGAGCGCCGCGAAAGTGAATATGAGAAAATGAAGGCCAAGG TGATGGATGCGCTCAAAAAGACCTTCCGGCCAGAGTTCATCAACCGCCTGGACGGCATCATGGTCTTCCGCAGCCTCACC AAGGAGGAGATCGCCCAGATCGTGGAGCTGGAGCTGCGCCCGCTGCGCATGCAGATGGCCGAGCATGAAATGGAGCTGAT CCTGACCGAGGCCGCACGCCGTGCCATCGCCGAAGCAGGGTACGATCCGGAATATGGCGCCCGACCCCTGCGCCGTGTCA TTCAGAACCAGATTCAGGACCCGCTCAGCGAGGGCATGCTGGCTGAAAAATTTGTACCGGGTGATACCATCACCGTGGAC TATCGCGAAGTGGTGGGCGAAGACGGCGTTGCGACCCATCAGTTCGTTTTCGAGGTCACGGCGCACAAGGATGTGACGAA GTCTTCAGAGGAGACCGACGAATTTGAGGCGTTGCTTCAATAA Protein sequence : MSDKLDRFTKRARRVLTLAQEEALRLNHNYIGTEHLLLGLVREENGVAVKVLRELGVEPVQIIRAVERTVGRGERPPFGK PTLAPRTKRVIELAVDEARLMGHHYIGTEHLLLGLVREGEGIAVNVLRGLGINLDRVRTQTARNILQSQAQTKDKQKKES KTPLMDQLGYDLTAAAEEGKLDPVIGREAEIERVIQILSRRTKNNPALIGEPGVGKTAIVEGLAQRIVEGNVPEPLLNKR LLMLDVGSLVAGTMYRGQFEERLKKVIEEVINSQSILFIDEVHMLVGAGAAGSSVDAANILKPALSRGELQVIGATTLDE YRKYIESDAALERRFQPILVEEPSIEQTIEILRGVRPRYEEHHKLIITDEALHAAAHLAARYVPDRFMPDKAIDLIDEAG SRVRMYKAPYAANLRETFMSLKKLQKEKEQALDMQRFDDAIDLRYREVELEARLSELRESWNEAANQPKVTAEDIAEVVS MWTGVPVSRIAGEERERLLDMERVMHQRIIGQDEPIKAIAKAVRRARAGLKDPKRPIGSFMFLGPTGIGKTLLAKTLAEF LFGSEEALIKLDMSEFMERHNVSRLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEIEKAHPEAFNMLLQIMEDGYLTD AKGRRVDFRNTLILMTSNIGAKLIQGAKGLGFVISQDEDEERRESEYEKMKAKVMDALKKTFRPEFINRLDGIMVFRSLT KEEIAQIVELELRPLRMQMAEHEMELILTEAARRAIAEAGYDPEYGARPLRRVIQNQIQDPLSEGMLAEKFVPGDTITVD YREVVGEDGVATHQFVFEVTAHKDVTKSSEETDEFEALLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005441873.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 56 |
| clpC | YP_005441873.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 4e-137 | 49 |
