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Name : copB (CLDAP_14470) Accession : YP_005441384.1 Strain : Caldilinea aerophila DSM 14535 Genome accession: NC_017079 Putative virulence/resistance : Resistance Product : copper-transporting ATPase CopB Function : - COG functional category : - COG ID : - EC number : - Position : 1816223 - 1818202 bp Length : 1980 bp Strand : + Note : - DNA sequence : ATGCATATCGATCACACCGGCCATGAGGCGTTGTTTCGTAGGCGCTTTTGGTGGTGCCTGGCGCTCAGTATCCCTGTCAT TCTCTACGACGAAATGGTGCAACAGTGGCTGAAATTGACGGTGCCCAACTTTCCAGGCAGCGAATGGGTTCCCCTGACAT TTTCGGTCATCATCTTTGGATACGGTGGCGTCCCATTTTTGCGGATGGCAATTCCGGAACTGCGGACCCGCAAGCCTGGC ATGATGGCGCTCATCTCGCTTGCCATCTCCATTGCTTTTATTTATAGCCTCGTTGTGGAACTGGGTGGTTTTGGCAAGAG TTTTTTCTGGGAGCAAGTCACTCTTATCGACGTCATGCTCTTAGGTCATTGGTTGGAAATGCGCTCGGTGCGTCAGGCTT CGAGCGCCCTGGATGAGTTGGCCAGGTTGTTGCCAGACACTGCTGAACGCATTCGCCAAGATGGCTCTGTCGAGACTGTG TCGGTCGCGTCCCTGCGCATTGGCGATCTGCTCCTGATTCGGCCAGGTGCCAGCATCCCCGCCGACGGTGAGATCATTGA AGGCGAGTCAACAGTCAATGAGGCAATGTTGACAGGCGAATCCAAACCTGTGAAAAAACGCACCGGAGATAAGGTAATCG CAGGAACCATCAACAGTGATGGCAGTCTGCGCGTGCGCGTCACGGCGACCGGCGACAAGACGGCGCTGGCCGGCATCATG CGGCTGGTAGAGCAGGCACAACAGTCCAAATCCAGAACACAAGTGCTTAGCGATCGCGCGGCCGGTTGGCTTTTTTATAT TGCGCTGCTCGTGGCGGCGTTGACTGCCGTTGGTTGGACGTTGGCGACAGGCTTTCATTGGGAAACGATCGAGAAGGTGG TCACTGTGCTGGTGATCTCTTGTCCACATGCCCTGGGTTTGGCTGTCCCGCTTGTGGTGGCGATTACGACCTCTCTCAGC GCTGCTAACGGCATTCTTGTGCGTAATCGGCTGGCGCTCGAAGCGGCGCGCAATCTGGACGTCGTGATCTTCGACAAAAC CGGCACATTGACGGAAGGCAGATTCGGCGTGACCGGCGTTCGCACTGTCAATGGATGGACGGAGGAAGAGGCGCTCATCT TTGCCGCTGCTGCCGAGGGAGACTCTGAACATCTGATTGCGCAGGCAATTCGAGCCGAAGCGCAGGCACGCAAATTGACG CTGCCGCCAGTGTCCAGGTTTGCTGCGCTCAAAGGAAAAGGTGTGCAAGCCTCCGTTGCCGATAGAACGGTTTTTGTAGG AGGACCGCAACTGTTAGAGTCGTTAAGTGTCGACGTTCCCGAAGCGCTGAGAGCATTTGCTGCAGAGGCTGGCAAGAAGG CGCAGTCAGCCATTTATCTGATCGTCGAGGGGCAGGCGGTCGCTGTTTTTTCAGTGGCCGATGTAATTCGTCCAGAAAGC AAAGAGGCCGTGGATTCTCTTCGCCAGATGGGGTTTGAAATCGCTATGATAACGGGCGACAGCCGGGCCGTCGCCGAGGC GGTTGCCGCTGAGTTGCAAATCGACTATGTGTTTGCCGAAGTGTTGCCAGAGAACAAGGTCCAGATCGTGATGGAATTCC AGCACCGGAGAAAACGGGTGGCAATGGTGGGAGACGGCGTCAATGATGCACCGGCGCTCGTGCAGGCCGATGTGGGCGTC GCTGTTGGCGCTGGAACCGACGTGGCCATCGAGTCTGCGGGCATCATCCTTGTAAAGAGCAATCCGCTCGATGTCGTCAA GATGATTGCCCTTAGCCGGGCCAGCCATCGTAAGATGGTGGAAAACCTATGGTGGGCTGCTGGATACAACGTGATTGCCC TGCCACTCGCCGCTGGCGCCTTGGCGCCTTGGGGCATCCACCTGACACCAGCACTGGGTGCAGGGTTTATGTCGCTGAGC ACGATCATCGTCGCCCTTAACGCGCAGTTGTTGCGCAGAAATCGCGTCTTCAGGCGCTAA Protein sequence : MHIDHTGHEALFRRRFWWCLALSIPVILYDEMVQQWLKLTVPNFPGSEWVPLTFSVIIFGYGGVPFLRMAIPELRTRKPG MMALISLAISIAFIYSLVVELGGFGKSFFWEQVTLIDVMLLGHWLEMRSVRQASSALDELARLLPDTAERIRQDGSVETV SVASLRIGDLLLIRPGASIPADGEIIEGESTVNEAMLTGESKPVKKRTGDKVIAGTINSDGSLRVRVTATGDKTALAGIM RLVEQAQQSKSRTQVLSDRAAGWLFYIALLVAALTAVGWTLATGFHWETIEKVVTVLVISCPHALGLAVPLVVAITTSLS AANGILVRNRLALEAARNLDVVIFDKTGTLTEGRFGVTGVRTVNGWTEEEALIFAAAAEGDSEHLIAQAIRAEAQARKLT LPPVSRFAALKGKGVQASVADRTVFVGGPQLLESLSVDVPEALRAFAAEAGKKAQSAIYLIVEGQAVAVFSVADVIRPES KEAVDSLRQMGFEIAMITGDSRAVAEAVAAELQIDYVFAEVLPENKVQIVMEFQHRRKRVAMVGDGVNDAPALVQADVGV AVGAGTDVAIESAGIILVKSNPLDVVKMIALSRASHRKMVENLWWAAGYNVIALPLAAGALAPWGIHLTPALGAGFMSLS TIIVALNAQLLRRNRVFRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 3e-78 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| copB | YP_005441384.1 | copper-transporting ATPase CopB | BAC0629 | Protein | 3e-111 | 50 |
| copB | YP_005441384.1 | copper-transporting ATPase CopB | BAC0079 | Protein | 3e-117 | 44 |
| copB | YP_005441384.1 | copper-transporting ATPase CopB | BAC0101 | Protein | 3e-73 | 43 |
| copB | YP_005441384.1 | copper-transporting ATPase CopB | BAC0383 | Protein | 1e-84 | 42 |
| copB | YP_005441384.1 | copper-transporting ATPase CopB | BAC0183 | Protein | 7e-69 | 41 |
