Gene Information

Name : CLDAP_12790 (CLDAP_12790)
Accession : YP_005441216.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1606837 - 1607409 bp
Length : 573 bp
Strand : -
Note : -

DNA sequence : 
ATGGTGGCCATCATGGGGCCTTCTGGCTGCGGCAAAACTACACTTCTTAACTGCCTTTCAGGCCTGGATGACTTCGATAA
GGGGGAAGTCTATATTGAGGGTGTTCGTCTGCGCACGATGAGTGACAAAGAACGCACACGTTATCGCGCCCGGCGCATGG
GCTTTGTTTTTCAGCTTCACAACTTATTGCCAGTAATCACTGCAGTTGAAAACGTGGAGTTACCGCTTCTTGTCTCCGGA
ATGCGCCCTGGTATGGCGCGTAAACGCGCCATGGAAGCGCTGGAACAGGTAGGCCTGGCCGATCGTGCGCATCACCGGCC
CGCAGAACTGTCGGGTGGACAACGTCAACGAGTCACAGTTGCCCGTGCCCTCGTTAACAACCCGGCGATTGTCTGGGCCG
ACGAGCCAACCGGCTCGCTGGACAGCAAATCCGCACAAGATGTCTTTGCGTTGATGCGGCGCCTCAATCAGGAACGCGGT
CAGACCTTCGTCGTCGTCACGCATGATCCCGAGGTTGCAGCCGCCTGTGATCGAGTCATCCACATGCTTGATGGGGAAAT
CCGCCATGGCTGA

Protein sequence : 
MVAIMGPSGCGKTTLLNCLSGLDDFDKGEVYIEGVRLRTMSDKERTRYRARRMGFVFQLHNLLPVITAVENVELPLLVSG
MRPGMARKRAMEALEQVGLADRAHHRPAELSGGQRQRVTVARALVNNPAIVWADEPTGSLDSKSAQDVFALMRRLNQERG
QTFVVVTHDPEVAAACDRVIHMLDGEIRHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-27 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLDAP_12790 YP_005441216.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-40 50
CLDAP_12790 YP_005441216.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-31 49
CLDAP_12790 YP_005441216.1 putative ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-33 43
CLDAP_12790 YP_005441216.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-31 41