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Name : lysS (CLDAP_01130) Accession : YP_005440050.1 Strain : Caldilinea aerophila DSM 14535 Genome accession: NC_017079 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 165421 - 166944 bp Length : 1524 bp Strand : - Note : - DNA sequence : ATGTTTGACCCCGATCGCCTCAGCGATCAGGAGCTGTCTCGCCTGAAAAATTTGCAGGGCTTGATCGAAGCGGGCATCGA TCCGTACCCGGCTCGTGCCAAACGTACGCACACGATTGCTGCCGCTCGCTCGCTCTACGAGCAAGGCCGGAGTGAAGGGC AGGAGGTCAGCGTAGCTGGCCGGCTGCGCCGCATCCGCATCATGGGCAAGATGAGTTTTGCCGATCTGGAGGATGGCACC GGCGTCATTCAACTGGTGCTGCGCAAGGATTCACTTCCAGGCGATTTTTACGACAACGTCTGGAAGCGGCTGATCGATCT CGGCGATTTCGTTGGAGCAACCGGCCCGCTCGTGGTCACCAAAACCGGTGAACTTAGCGTGGATGTGCGCGAGCTGCAGT TTTTGAGCAAAACGCTCAAACCCATGCCCGATAAATGGCATGGTGTGCGCGACCAGGAGAAACGCTACCGCCGTCGCTAC GTCGATCTGCTCGCCAATCCAGGGGTACGTGAGATTTTTCGTAAACGCGCTGCGATCGTGCGTGCCTTGCGGGAGTATCT GGATAGCGAAGGCTTTCTAGAGGTAGAGACCCCCATCCTTCAGCCGATCTACGGCGGCGCGGCGGCGCGTCCCTTTATCA CGCATCACAATCAGCTCCACCAGGATCTCTACCTGCGCATCAGCTTCGAGCTTTATCTGAAGCGGCTCATCGTCGGCGGC TATGACCGCGTGTACGAGATCGGCCGCGATTTTCGCAATGAAGGGGTGAGCTTCAAGCACAACCCCGAATTCACTCAACT GGAATTCTACGAAGCGTACGCCGATTACAACGATGTCATGCGTCGTGCCGAAGAAATGATCGCCTATGTGGCGCGCAAGG TCACCGGCGGTCACATCATCACCTGGCAGGGTCATGCTATTGATGTCACGCCGCCATGGCGTCGCATTCCTCTGCGTCAG GCCATCCTGGACGCCACCGGCATCGACTACGAGAGCTATCCCGACGCAGCATCCCTGGCGGCGGAGATGCGCCGTCGCGG CCACGAGCCGGACCCGCGCAGCTCCTGGGGGAAGCTGGTAGACAGCCTGATGGCCAAATATGTCGAGCCGAACCTCATTC AGCCCACTTTTTTGATCGATTATCCGCGCGATGTCAGCCCGCTGGCCAAAGGCTCTCCTGGCGATCCGCGCCAGGTCGAG CGCTTTGAAGGCTTCATGGCCGGCATGGAAATTTGCAACGCCTTCAGCGAGATCAACGACCCGATCGATCAGCTACAACG GTTTCTGGACGAAAATTACCGGGCTCGGCACGGCGATGAAGAGGCGCACCCCATCGATGAGGATTTCATTGAGGCGCTTT GTTATGGCATGCCGCCGACCGGTGGTTTCGGCATGGGAATCGACCGCTTGACCATGATCTTCACGGACACAGACACGATC CGGGAAGTCATCCTCTTCCCACATCTGCGTTCGATCAAAGAGGAGGAAGAAGAAGTGGACAGCGTTGAGGCGGCTCAGAA GTAG Protein sequence : MFDPDRLSDQELSRLKNLQGLIEAGIDPYPARAKRTHTIAAARSLYEQGRSEGQEVSVAGRLRRIRIMGKMSFADLEDGT GVIQLVLRKDSLPGDFYDNVWKRLIDLGDFVGATGPLVVTKTGELSVDVRELQFLSKTLKPMPDKWHGVRDQEKRYRRRY VDLLANPGVREIFRKRAAIVRALREYLDSEGFLEVETPILQPIYGGAAARPFITHHNQLHQDLYLRISFELYLKRLIVGG YDRVYEIGRDFRNEGVSFKHNPEFTQLEFYEAYADYNDVMRRAEEMIAYVARKVTGGHIITWQGHAIDVTPPWRRIPLRQ AILDATGIDYESYPDAASLAAEMRRRGHEPDPRSSWGKLVDSLMAKYVEPNLIQPTFLIDYPRDVSPLAKGSPGDPRQVE RFEGFMAGMEICNAFSEINDPIDQLQRFLDENYRARHGDEEAHPIDEDFIEALCYGMPPTGGFGMGIDRLTMIFTDTDTI REVILFPHLRSIKEEEEEVDSVEAAQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-91 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005440050.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 8e-92 | 44 |
