Gene Information

Name : CLDAP_10650 (CLDAP_10650)
Accession : YP_005441002.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Resistance
Product : putative cation-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1332581 - 1334572 bp
Length : 1992 bp
Strand : +
Note : -

DNA sequence : 
GTGGCGACGGCCGGTGTAAAACCTGAGTGGCGCACATGGACGTTTTGGAAGGAAAATTATGAGTTTATTCTGGCTTTCAT
TACGCTCGCTGCGCTGTTGACAGGCTGGTTCGGCGGAGAAGTGACCGAACGCCTGCCCGGATGGAGCGTCACCATCCTGG
CGCTGATCGCCTTTCTTGCCGGCGGCTACTCCGGCTTCCTGGGCGCCTGGGAGCAGGCGCGACAGGGAAAATTTGATATC
GACTTTTTGATGCTGGCCGCCGCGCTGGGCGCTGCCTTGATTGGCGAATGGACCGAGGGCGCGCTGTTGCTCTTTCTTTT
CACGCTGAGCGGCGCGCTGGAAACATACGCCATGGGACGGACGCGTAAAGCCATCGAGGCCTTGGGGAAGCTGCGCCCAG
AGACGGCGCTCGTCCGTCGCGGTGATGGGGAGGTCGTCCTGCCGGTCGAACAGCTCGCAATTGGAGATGTCGTCGTGGTC
AAGCCGGGCGAACGCCTGCCGATCGACGGCGTCGTTATACAGGGAACGAGCAGCGTCGATCAAAGTGCCATCACCGGCGA
GAGCATTCCCGTGACCAAACGTCCTGGCGATCAGGTCTTCGCCGGCACGATCAACGGCGGCGGCGCCCTGGAAGTCGAAG
TCACCAAACTGGCCGCCGAAAGCACGCTCAGCCGCATCATCAAGCTTGTGGAAGAGGCCCGTGAAGACGCCACGCCGACG
CAGAAATTTATCGACCGCTTCAGTCAACCTTATACCTATACGGTCATCGGCGCTACGGCGCTGGCAATTGTATTGCCCAT
CCTCTTTCTAAACGAGCCCTTCGATGTGACGCTTTATCGCGCCATGACGCTGCTCGTGGTGGCCAGCCCTTGCGCACTGA
TCATCAGCACCCCGGCCAGCACGTTGAGCGCCATCGCAGCGGCAGCGCGCAACGGCGTACTCTTCAAAGGCGGCGCCTAT
CTGGAGCTGCTCGCCAATACGGATGCGGTGGCGTTCGATAAAACCGGGACGTTGACTCCGGGCAAACCGGTTGTGACCAA
CGTCCATCCGCTTGCTGGCCACACCGCCGAGAACCTGTTGCGCATGGCCGCCAGCGCTGAAACGTTGAGTGAGCATCACG
TTGGCAAAGCCATCGTGGAAAAGGCGTTGTCGATGGGGCTTGAACTGGAAAAGCCGATCGACTTCAGGGCGATTCCGGGC
GAAGGCATCTGGGCGTGCTTTGCCCGTGCAGACCACGTCGAGACGATCTACATCGGCAACGATCGTCTATTTATGAATCA
GCAGATGGATCTCTCACCGGCGATCCGGATGATCGGCGCTGCCCTACAGCGACAAGGCAAGACGGTGATGCTGGTGGTGC
GGCGCAGCACGGTGGAGGACACGCTCGGGAAAGATCGCGACTGGGAGGTGATGGGTTATATCGCCGTTGCGGATGAGCTG
CGCCCTGAAGCAGCCGAGACCATCCGTCAATTGCGTCGCATCGGCGTCAAACGCATCGTCATGATGACCGGCGACAATCG
CGCTGCCGCCCAGTACATCGCCCAGCAGGCAGGCATTGAGGAAGTGTACGCCGAACTGCTGCCGGAGCAGAAGCTTGAGC
TTGTCAAACAGCTTCGCGAACAAAACACCGTCGCGATGGTCGGCGACGGTGTGAACGATGCGCCGGCGCTGGCGACCGCG
CACGTTGGCGTCGCCATGGGGGCGGGAGGCACCGACGTAGCACTTGAAACTGCAGACGTGGTCTTGATGTCGAGCGATCT
TTCGAAATTGCCTTTTGCGCTGCAATTGAGCCGCCGCGCCAATCGCATCATTCGACAAAACGTCGCCTTCTCTCTCGGCG
TCATTGTGATGCTGGTGACGGCGACAATCGTGCTCCCCCTGTTTGTGGCGGGCTTTGTGCTTCCGTTGCCGCTCGGCGTT
GTAGGCCATGAGGGCAGCACACTCGTCGTAGTCGCCAATGGTCTGCGCCTCCTGCGTATGCGGGCTGCTTAA

Protein sequence : 
MATAGVKPEWRTWTFWKENYEFILAFITLAALLTGWFGGEVTERLPGWSVTILALIAFLAGGYSGFLGAWEQARQGKFDI
DFLMLAAALGAALIGEWTEGALLLFLFTLSGALETYAMGRTRKAIEALGKLRPETALVRRGDGEVVLPVEQLAIGDVVVV
KPGERLPIDGVVIQGTSSVDQSAITGESIPVTKRPGDQVFAGTINGGGALEVEVTKLAAESTLSRIIKLVEEAREDATPT
QKFIDRFSQPYTYTVIGATALAIVLPILFLNEPFDVTLYRAMTLLVVASPCALIISTPASTLSAIAAAARNGVLFKGGAY
LELLANTDAVAFDKTGTLTPGKPVVTNVHPLAGHTAENLLRMAASAETLSEHHVGKAIVEKALSMGLELEKPIDFRAIPG
EGIWACFARADHVETIYIGNDRLFMNQQMDLSPAIRMIGAALQRQGKTVMLVVRRSTVEDTLGKDRDWEVMGYIAVADEL
RPEAAETIRQLRRIGVKRIVMMTGDNRAAAQYIAQQAGIEEVYAELLPEQKLELVKQLREQNTVAMVGDGVNDAPALATA
HVGVAMGAGGTDVALETADVVLMSSDLSKLPFALQLSRRANRIIRQNVAFSLGVIVMLVTATIVLPLFVAGFVLPLPLGV
VGHEGSTLVVVANGLRLLRMRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 4e-97 43
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 5e-97 43
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 5e-97 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLDAP_10650 YP_005441002.1 putative cation-transporting ATPase BAC0092 Protein 3e-92 45
CLDAP_10650 YP_005441002.1 putative cation-transporting ATPase BAC0100 Protein 5e-61 44
CLDAP_10650 YP_005441002.1 putative cation-transporting ATPase BAC0099 Protein 1e-77 43
CLDAP_10650 YP_005441002.1 putative cation-transporting ATPase BAC0298 Protein 8e-74 43
CLDAP_10650 YP_005441002.1 putative cation-transporting ATPase BAC0461 Protein 4e-64 41