Gene Information

Name : qseB (RGE_09260)
Accession : YP_005435766.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein QseB
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.13.3
Position : 963098 - 963754 bp
Length : 657 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATCCTGCTCGTCGAAGACGATCCGCTGCTCGGCGACGGCCTGCGGGCCGGGCTCTCCCAGGCCGGCTTCCAGGT
CGACTGGGTGCGCGACGGCGAGGCCGCGTCGCGCGAGCTGCGCTCGGCGGTGCACACCGCCGCGGTGCTGGACCTGGGCC
TGCCGCGCAAGGACGGCCTGGAGGTGCTGGCCGAGACCCGCGCCGCCGGCGTGCGCCTGCCGGTGCTGGTGCTGACCGCG
CGCGACGCCGTCAGCGACCGCGTCATCGGCCTGGACGGCGGTGCCGACGACTACGTCGTCAAGCCCGTGGACCTGGACGA
ACTCGCTGCGCGGCTGCGCGCGCTGATCCGCCGCGCCCACGGCCAGACGCAGGACCTGCTGGCCGCCGGCGAGGTCGTGC
TCGACCCCGCGGCGCGCACCGTCACGCATGCCGGCGAGCCGGTCGTGCTGTCGCAGCGCGAGTTCGACCTGCTGCATGCG
CTGATGCTCAACGCCGGGCGCGTGCTGACGCGCGAGCAGCTCGAACAGCACCTGTACCGCTGGGGCCGCGAGGTCGAGAG
CAACGCCGTCGAGGTGCACGTGCACCACCTGCGGCGCAAGCTCGGCGCCGAGCTCGTGCAGACCGTGCGCGGCGTCGGTT
ACCTGCTGCCCGCCTGA

Protein sequence : 
MRILLVEDDPLLGDGLRAGLSQAGFQVDWVRDGEAASRELRSAVHTAAVLDLGLPRKDGLEVLAETRAAGVRLPVLVLTA
RDAVSDRVIGLDGGADDYVVKPVDLDELAARLRALIRRAHGQTQDLLAAGEVVLDPAARTVTHAGEPVVLSQREFDLLHA
LMLNAGRVLTREQLEQHLYRWGREVESNAVEVHVHHLRRKLGAELVQTVRGVGYLLPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-35 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_005435766.1 transcriptional regulatory protein QseB BAC0487 Protein 4e-32 45
qseB YP_005435766.1 transcriptional regulatory protein QseB NC_002516.2.879194.p Protein 3e-27 43
qseB YP_005435766.1 transcriptional regulatory protein QseB BAC0197 Protein 7e-30 42
qseB YP_005435766.1 transcriptional regulatory protein QseB BAC0083 Protein 1e-25 41
qseB YP_005435766.1 transcriptional regulatory protein QseB BAC0638 Protein 6e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_005435766.1 transcriptional regulatory protein QseB VFG0473 Protein 8e-37 46
qseB YP_005435766.1 transcriptional regulatory protein QseB VFG1390 Protein 2e-30 42