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Name : gspE (RGE_07940) Accession : YP_005435636.1 Strain : Rubrivivax gelatinosus IL144 Genome accession: NC_017075 Putative virulence/resistance : Virulence Product : putative general secretion pathway protein E GspE Function : - COG functional category : - COG ID : - EC number : - Position : 827522 - 828940 bp Length : 1419 bp Strand : - Note : - DNA sequence : ATGGCCACGCGACACCCGCTGCCCTACGCGTTCGCCAAGGCGAACACGCTGCTGCTGGAAGACGACGGCCAGCTCGTGCT GTGGGCCGGCGAGACGACGCCGCCGGCAGCGCTGGCCGAGGTCACGCGGCTGTTCGAGGTCTCGGCCTTCGAGCACGAGC CGAGCGCGACGCTCGCGCAGCGCATCGCCGCGGCCTACGCCGGCGGCGAGAGCAGCGCCGCGGCCGTCATCGGCGAGGTC GAAAGCGGCGTCGACCTGTCGCGCATGATGCAGGAGCTGCCGGCGGTCGAGGACCTGCTCGAAGCCGCCGACGACGCGCC GATCATCCGCATGCTCAACGCGCTGCTGACGCAGGCCGCCAAGGACGGCGCGAGCGACATCCACATCGAGCCCTACGAAC GCAGTTCCAGCGTGCGTTTCCGCGTCGACGGCACGCTGCGTGAAGTCGTGCAGCCGAACAAGGCGCTGCACGCGGCGCTG ATCAGCCGGCTGAAGATCATGGCCGAGCTCGACATCTCCGAGAAACGCCTGCCGCAGGACGGCCGAATCAGCTTGCGCAT CGGCGGCCGCGCGATCGACGTGCGCGTCTCGACGCTGCCCTCGGCGCACGGCGAACGCGCGGTGCTGCGCCTGCTGGACA AGGCCGAGTCGAAGTTCACGCTCGAAGGCCTGGGCATGGACGGCGAGGTGCTGCAGCGCTTCGAGCGCCTGATCCAGCAG CCGCACGGCATCGTGCTCGTCACCGGCCCCACCGGCAGCGGCAAGACGACGACGCTGTACGCCTCGCTGGGCCGGGTCGA CACCGCGACGACCAACGTGCTGACCGTCGAAGACCCGGTCGAATACGAGCTGCCCGGCATCGGCCAGACGCAGGTGAATC CGAAGATCGACCTCACGTTCGCCAAGGCGCTGCGCGCCATCCTGCGCCAGGACCCGGACGTCATCATGATCGGCGAGATC CGCGACTACGAGACCGCGCAGATCGCGATCCAGGCCTCGCTGACCGGCCACCTGGTGCTGGCGACGATCCACACCAACGA CGCGCCGTCCTCGGTCACGCGGCTGATCGACATGGGCGTCGAGCCCTATCTGCTGTCCTCCAGCCTGCTCGGCGCGCTGG CCCAGCGCCTGGTGCGCAAGCTCTGCCCGGCCTGCAAGCGCCAGGACGGCGAAGGCCGCTGGCACCCGGTCGGCTGCCCG GCCTGCAGCCACACCGGCTACAAGGGCCGCACCGGCGTCTACGAGCTGATGGTCGTCGACGAGAAGGTGCAGACGCTGAT CCACGAACGCGGCTCGGAGCAGGACCTGGCCGCCGCCGCGCGCGCCAACGGCCTCAGCTCGATGCGCGAGGACGGCGAGC GCCTGATCGCCGCCGGCCTGACCTCGGCCGAGGAAGTCATCCGCGTGACGAGAGACTGA Protein sequence : MATRHPLPYAFAKANTLLLEDDGQLVLWAGETTPPAALAEVTRLFEVSAFEHEPSATLAQRIAAAYAGGESSAAAVIGEV ESGVDLSRMMQELPAVEDLLEAADDAPIIRMLNALLTQAAKDGASDIHIEPYERSSSVRFRVDGTLREVVQPNKALHAAL ISRLKIMAELDISEKRLPQDGRISLRIGGRAIDVRVSTLPSAHGERAVLRLLDKAESKFTLEGLGMDGEVLQRFERLIQQ PHGIVLVTGPTGSGKTTTLYASLGRVDTATTNVLTVEDPVEYELPGIGQTQVNPKIDLTFAKALRAILRQDPDVIMIGEI RDYETAQIAIQASLTGHLVLATIHTNDAPSSVTRLIDMGVEPYLLSSSLLGALAQRLVRKLCPACKRQDGEGRWHPVGCP ACSHTGYKGRTGVYELMVVDEKVQTLIHERGSEQDLAAAARANGLSSMREDGERLIAAGLTSAEEVIRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-100 | 57 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-100 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_005435636.1 | putative general secretion pathway protein E GspE | VFG0182 | Protein | 5e-106 | 60 |
| gspE | YP_005435636.1 | putative general secretion pathway protein E GspE | VFG1876 | Protein | 2e-103 | 53 |
| gspE | YP_005435636.1 | putative general secretion pathway protein E GspE | VFG2048 | Protein | 1e-100 | 51 |
| gspE | YP_005435636.1 | putative general secretion pathway protein E GspE | VFG2426 | Protein | 5e-74 | 48 |
