Gene Information

Name : RGE_07380 (RGE_07380)
Accession : YP_005435580.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 768060 - 768734 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGCGACTGCTGCTCGTCGAAGATGACCGGATGATCGGCGAGAGCCTGCGCGCCGCGCTCAGGCTCGAAGGCCATGCCGT
GGACTGGGTGCGCGACGTCGCCGCCGCGCGCGCCTCGCTGGCCAGCGAACGTTTCGACTGCGTGCTGCTGGACCTGGGCC
TGCCGCCCGGCGGCCCGCCCGGCGCACCGCCGGCCGACGGCCTGGACGTGCTGCGCGAACTGCGCGGCCGCGCCGACACC
ACGCCGGTCATCGTGCTGACCGCACGCGACGCCAGCGGCGACCGCGTGCGCGGCCTGGACGGCGGCGCCGACGACTACCT
CGTCAAGCCCTTCGAGTTCGACGAGCTGACGGCGCGCATCCGCGCCGTCACGCGCCGCCACGGCGGCCGTGCCGGCCCGC
TGCTGACGCACGGCGGCGTCACGCTGGACCCGGCGACGCGCCAGGTGACGCTCAACGGCGAGCCGGTGCTGCTGTCGGCG
CGCGAGTTCGCGGTGCTGGAAGCGCTGATGCAGCGCCCCGGCGCGGTGCTCTCGCGCGCCCAGCTCGAGGACCGGCTCTA
CGGCTGGGGCGACGCGGTCGAGAGCAACGCCGTCTCGGTCTACATCCACCAGCTGCGGCGCAAGCTGGGCGCCGACTTCA
TCCGCAACATGCGCGGCGTCGGCTACTTCCTGTGA

Protein sequence : 
MRLLLVEDDRMIGESLRAALRLEGHAVDWVRDVAAARASLASERFDCVLLDLGLPPGGPPGAPPADGLDVLRELRGRADT
TPVIVLTARDASGDRVRGLDGGADDYLVKPFEFDELTARIRAVTRRHGGRAGPLLTHGGVTLDPATRQVTLNGEPVLLSA
REFAVLEALMQRPGAVLSRAQLEDRLYGWGDAVESNAVSVYIHQLRRKLGADFIRNMRGVGYFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-22 44
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RGE_07380 YP_005435580.1 winged helix family two component transcriptional regulator BAC0197 Protein 2e-26 45
RGE_07380 YP_005435580.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-22 42
RGE_07380 YP_005435580.1 winged helix family two component transcriptional regulator BAC0638 Protein 3e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RGE_07380 YP_005435580.1 winged helix family two component transcriptional regulator VFG0596 Protein 4e-23 44
RGE_07380 YP_005435580.1 winged helix family two component transcriptional regulator VFG1390 Protein 2e-25 41