Gene Information

Name : cadR (RGE_06200)
Accession : YP_005435464.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Resistance
Product : transcriptional regulator, MerR family CadR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 648238 - 648708 bp
Length : 471 bp
Strand : +
Note : -

DNA sequence : 
ATGGTGATGCGCATCGGCGAACTCGCGGCGGCCTGCGGCACGCCGGTCGAAACGATCCGCTACTACGAACGTGAAGGCCT
GCTGCCGGCGGCGCCGCGTTCGGGCGGCAACTACCGCGTCTACGGCGAAGCCGAGCTGGAGCGCCTGGCCTTCATCCGCC
AGTGCCGCGCGCTGGACATGTCGCTCGACGAGGTGCGTGCGCTGCTCGCCTTCCGCGACTCGCCGCCGGCCGACTGCAGC
GGCGTCAATACGCTGCTGGACGAACACATCGGCCACGTCGTGCACCGCATCGAGGAACTGCGTGCGCTGGAAGCCTCGCT
GCGGGCGCTGCGCGCGCGCTGCGACACGCCGGGCGACGGTGCTGCCTGCGGCATCCTCAGCGGCCTGGGCCAGGTGGCGC
TGCCCGAGGCCGCGCCGCACACCGGCGGCGTGCACGAGCACGCGGCGACACACGCGCCGCGGCGGCGCTGA

Protein sequence : 
MVMRIGELAAACGTPVETIRYYEREGLLPAAPRSGGNYRVYGEAELERLAFIRQCRALDMSLDEVRALLAFRDSPPADCS
GVNTLLDEHIGHVVHRIEELRALEASLRALRARCDTPGDGAACGILSGLGQVALPEAAPHTGGVHEHAATHAPRRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 3e-27 52
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 6e-29 50
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 9e-29 50
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 8e-29 50
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 6e-29 50
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 5e-29 50
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 4e-29 50
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 4e-29 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadR YP_005435464.1 transcriptional regulator, MerR family CadR BAC0058 Protein 8e-32 56
cadR YP_005435464.1 transcriptional regulator, MerR family CadR BAC0301 Protein 2e-32 56