Gene Information

Name : RGE_46870 (RGE_46870)
Accession : YP_005439519.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5021478 - 5022173 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence : 
GTGAACACGCCGCCGCTGATCCGCATCCAGGGGCTGCGCAAGACCTACCGCCGCGGCGAGCAGGACATCCCGGTGCTCGA
AGGCATCGACCTGGACGTGCACGCCGGCGAGTTCGTCGCGCTGATGGGCCCCAGCGGCTCGGGCAAGAGCACGCTGCTGA
ACCTGGTGGCCGGCATCGACAAGCCGAGCGCCGGCACGATCGAGATCGCCGGCACCGACATCGCGACGCTGGACGAAGGC
CAGCTCGCAGACTGGCGCGCCGCCAACGTCGGCTTCATCTTCCAGTTCTACAACCTGCTGCCGGTGCTGACCGCGGCCGA
GAACGTCGAGCTGCCGCTGCTGCTGACCAACCTCACGGCGCGCGAGCGCCGCGAGCGGGTCGCCCAGGCGCTGGCGCTGG
TGTCGCTGGCCGACCGCGCCGGGCACTATCCGAACGAGCTCTCCGGCGGCCAGCAACAGCGCGTGGCGATCGCGCGCGCG
CTGGTCGGCGACCCGACGCTGATCGTCGCCGACGAGCCCACCGGCGACCTCGACCGCCACACCGGCGAAGAGGTGCTGTC
GCTGCTGGAGCAGCTCGTCGCCGAGCTCGGCAAGACCATCGTCATGGTCACCCACGACCCCAAGGCCGCGGCGCGTGCGC
ACCGCCTGGTGCACCTGGAAAAAGGCGTGCTGGTCGACGAGGCCGCGGCCGGCTGA

Protein sequence : 
MNTPPLIRIQGLRKTYRRGEQDIPVLEGIDLDVHAGEFVALMGPSGSGKSTLLNLVAGIDKPSAGTIEIAGTDIATLDEG
QLADWRAANVGFIFQFYNLLPVLTAAENVELPLLLTNLTARERRERVAQALALVSLADRAGHYPNELSGGQQQRVAIARA
LVGDPTLIVADEPTGDLDRHTGEEVLSLLEQLVAELGKTIVMVTHDPKAAARAHRLVHLEKGVLVDEAAAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-38 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 46
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RGE_46870 YP_005439519.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-46 50
RGE_46870 YP_005439519.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-50 49
RGE_46870 YP_005439519.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-43 43