Gene Information

Name : RGE_43830 (RGE_43830)
Accession : YP_005439218.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Resistance
Product : putative macrolide ABC transporter ATP binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4694846 - 4695553 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTTCCCTGCTGGAGCTTTCCGGCATCACCAAGACCTACGGCGAAGGCAGCGCCGCGTTCCGCGCCTTGCGCGGCAT
CGACCTGGAGATCCCGGCCGGCGAGTTCACCGCGGTGATGGGCCCCAGCGGCTCGGGCAAGTCGACGGTGATGAACCTGA
TCGGCTGCCTGGACACGCCGACCAGCGGCAGCTACCGCTTCCGCGGCGTCGAGGTCACGGGCATGAGCCGCGACCAGCGC
GCGCTGCTGCGCCGCCGCCACATCGGCTTCGTCTTCCAGGGCTTCCACCTGCTGGCGCGCACCAGCGCGCAGGAGAACGT
CGAGCTGCCGCTGCTGTACCGCGGCGAAGGCGCCAAGCAGCGCCACGCCGCGGCGCGGCGCGCGCTCGAGCAGGTCGGCC
TGGCGGGCTGGGAGCACCACACGCCGGCCGAGCTCTCGGGCGGCCAGCAGCAGCGCGTGGCGATCGCGCGCGCCATCGTC
ACCGAGCCGACGCTGCTGCTCGCCGACGAGCCCACCGGCAACCTGGACAGCGAACGGGGCCGCGAGGTGATGTCGCTGCT
GGTCGCGCTCAACCGCGAGCACCGCATCACCGTCGTGATGGTCACGCACGAGCCCGACATGGCGGCCTACGCCCAGCGCA
TCGTGCGTTTCCGCGACGGTCTGATCGCCGGCGACGAACGGGTCGCGGAGGCCGAACGATGCTGCTGA

Protein sequence : 
MSSLLELSGITKTYGEGSAAFRALRGIDLEIPAGEFTAVMGPSGSGKSTVMNLIGCLDTPTSGSYRFRGVEVTGMSRDQR
ALLRRRHIGFVFQGFHLLARTSAQENVELPLLYRGEGAKQRHAAARRALEQVGLAGWEHHTPAELSGGQQQRVAIARAIV
TEPTLLLADEPTGNLDSERGREVMSLLVALNREHRITVVMVTHEPDMAAYAQRIVRFRDGLIAGDERVAEAERCC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RGE_43830 YP_005439218.1 putative macrolide ABC transporter ATP binding protein NC_012469.1.7686878. Protein 6e-57 53
RGE_43830 YP_005439218.1 putative macrolide ABC transporter ATP binding protein NC_008702.1.4606598. Protein 1e-46 53
RGE_43830 YP_005439218.1 putative macrolide ABC transporter ATP binding protein CP001581.1.gene798.p Protein 1e-43 45
RGE_43830 YP_005439218.1 putative macrolide ABC transporter ATP binding protein CP001581.1.gene598.p Protein 2e-40 43
RGE_43830 YP_005439218.1 putative macrolide ABC transporter ATP binding protein NC_012469.1.7685735. Protein 3e-35 41