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Name : lysS (RGE_41580) Accession : YP_005438993.1 Strain : Rubrivivax gelatinosus IL144 Genome accession: NC_017075 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase LysS Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 4462531 - 4464033 bp Length : 1503 bp Strand : + Note : protein synonym:lysine--tRNA ligase DNA sequence : TTGCGGCACATCACCGGGCCCCCCATGACCGACGACAACCAACTGATCGCCGAACGCCGCGAGAAGCTGCAAGCCATCCG CGCCGCAGGCGTCGCTTTCCCCAACGACTTCAAGCCGCGCCACCACGCCGCGGACCTGCACCACAAACACGGCCAGGTGC CCAACGAGGAACTCGAGCCGCAGGCCGTCACGGTCTCGGTCGCCGGCCGCATGATGTTGAAGCGCGTGATGGGCAAAGCC TGTTTCGCGACGCTGCAGGACGCCACCGGCCGCATCCAGCTCTACGTCACGCAGGACGCCGTCGGGCCCGAGACCCTGGC CGCGTTCAAGCGCTGGGACCTGGGCGACATCCTCGGCTGCGAAGGCACGCTGTTCCGCACCAAGACCGGCGAGCTGTCGA TCAAGGCGACCCGCGTTCGCCTGCTGACCAAGAGCCTGCGGCCGCTGCCGGACAAGTTCCACGGCATGACCGACCAGGAA CAGAAGTACCGCCAGCGCTACGTCGACCTGATGACCGACGACGCTGCGCGCGCGCGTTTCGTCGCCCGCAGCAAGGCCGT CAGCTCGATCCGCCAGTACATGGTCGAGCACGGCTTCCTCGAGGTCGAGACGCCGATGCTGCATCCGATCCCGGGCGGCG CGAACGCCAAGCCTTTCGTCACGCACCACAACGCGCTGGACCAGGAGATGTTCCTGCGCATCGCGCCCGAGCTCTACCTG AAGCGGCTGCTGGTCGGCGGCTTCGAGCGGGTGTTCGAGATCAATCGCAACTTCCGCAACGAGGGGATCAGTGTCCGGCA CAACCCCGAGTTCACGATGATGGAGTTCTACGCGGCGTACTGGACGCACCACGACCTGATGGACTTCACCGAACAGGTCC TGCGCCACGCCGCACGCGCCGCCACCGGCAGCGCCAAGCTGAGCTACGCCGGCCGCGAGGTCGACCTCGACCAGCCGTTC GCGCGCCTGTCGGTGCGCAACTCGCTGGTCGTGCACGCCGGCGTCAGCGAGAGCGAGGCCGACGACGCCGCGGCGCTGCA CGCCAAGCTCAAGGAACTGGGCGAAGAGCCGCCGGCGCACTGGACGCTGGCCGAGCTGCAGTTCGGCCTGTTCGAAGCCG CGGTCGAAGAAAAGCTCTGGCAGCCGACCTTCATCGTCGACTATCCGGTCGAGGTCTCGCCGCTGGCGCGTGCGTCGGAC AGCAACCCGTCGATCACCGAACGTTTCGAGCTCTTCATCACCGGGCGCGAATACGCCAACGGCTTCTCCGAGCTCAACGA CGCCGAGGACCAGGCGGCACGTTTCCAGGCCCAGGTGGCGAACAAGGACGCCGGCGACGAGGAGGCGATGTATTACGACG CCGACTTCATCCGCGCGCTGGAGTACGGCATGCCCCCGGCCGGTGGTTGCGGCATCGGCATCGACCGGCTCATCATGCTG CTGACCGACAGCCCCAGCATCCGCGACGTGATCCTGTTCCCCGCCCTGCGGCGCGAGGCCTGA Protein sequence : MRHITGPPMTDDNQLIAERREKLQAIRAAGVAFPNDFKPRHHAADLHHKHGQVPNEELEPQAVTVSVAGRMMLKRVMGKA CFATLQDATGRIQLYVTQDAVGPETLAAFKRWDLGDILGCEGTLFRTKTGELSIKATRVRLLTKSLRPLPDKFHGMTDQE QKYRQRYVDLMTDDAARARFVARSKAVSSIRQYMVEHGFLEVETPMLHPIPGGANAKPFVTHHNALDQEMFLRIAPELYL KRLLVGGFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWTHHDLMDFTEQVLRHAARAATGSAKLSYAGREVDLDQPF ARLSVRNSLVVHAGVSESEADDAAALHAKLKELGEEPPAHWTLAELQFGLFEAAVEEKLWQPTFIVDYPVEVSPLARASD SNPSITERFELFITGREYANGFSELNDAEDQAARFQAQVANKDAGDEEAMYYDADFIRALEYGMPPAGGCGIGIDRLIML LTDSPSIRDVILFPALRREA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-133 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005438993.1 | lysyl-tRNA synthetase LysS | VFG1668 | Protein | 2e-133 | 55 |
