Gene Information

Name : ureC (RGE_40090)
Accession : YP_005438844.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Virulence
Product : urease subunit alpha UreC
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.5
Position : 4313620 - 4315350 bp
Length : 1731 bp
Strand : +
Note : protein synonym:urea amidohydrolase subunit alpha

DNA sequence :
ATGAGCACGAGCATCGGACGGCGCGCTTACGCCGAGATGTACGGCCCGACGCTGGGCGACCGCGTGCGCCTGGCCGACAC
CGAACTGATCGTCGAGGTCGAGGCCGACTACACGCTGCGCGCCGGCGGTTACGGCGAGGAGGTGAAGTTCGGCGGCGGCA
AGACGATCCGCGACGGCATGGGCCAGGGCCAGGCGGTCAACGGCCCCGGCCACCACGAGGCGGCCGACTGCGTCATCACC
AACGCGCTGATCATCGACCACTGGGGCATCGTCAAGGCCGACATCGGCCTGAAGGGCTGCCGCATCGCCGCCATCGGCAA
GGCCGGCAACCCCGACGTGCAGCCGGGCGTGGACATCGTCATCGGCCCGGGCACCGAGATCATCGCCGGCGAGGGGATGA
TCGTCACCGCCGGCGGCATCGACAGCCACATCCACTTCATCTGCCCGCAGCAGATCGATGAGGCGCTGAACTCGGGCGTC
ACGACGATGCTGGGCGGCGGCACCGGGCCGGCCACCGGCACCTTCGCGACCACCTGCACGCCGGGGCCGGAGAACCTGCA
CCGCATGCTGCAGGCGGCCGACGCCTTCGCGATGAATCTGGGCTTCCTCGGCAAGGGCAACGCCAGCCGGCCCGAGGCGC
TGAGCCAGCAGATCGCCGCCGGCGCCATCGGCCTGAAGCTGCACGAGGACTGGGGCACGACGCCCAGCGCGATCGACAAC
TGCCTGGACATCGCCGAGGCCACCGACACCCAGGTCTCGATCCACAGCGATACGCTCAACGAGTCGGGCTTCGTCGAGGA
CACGATCGCCGCGACCAAGGGCCGCACGCTCTGCGCCTTCCACACCGAAGGCGCCGGCGGCGGCCACGCGCCGGACATCC
TGCGGGTCGCCGGCGAGCCCAACTTCCTGCCCAGCAGCACCAACCCGACGATGCCCTACACCGCCAACACGGTGGACGAG
CACCTGGACATGCTGATGGTCTGCCACCACCTGGACGCCGGCATCGCCGAGGACCTGGCCTTCGCCGAGAGCCGCATCCG
CCGCGAGACCATCGCCGCCGAGGACGTGCTGCACGACCTGGGCGCGATCAGCATGATGAGCAGCGACAGCCAGGCGATGG
GCCGCGTCGGCGAGGTCATCATCCGCACCTGGCAGACGGCGCACAAGATGAAGGTCCAGCGCGGCGCGCTGGCCGGCGAC
AACGCCCGCAACGACAACCAGCGCGTCAAGCGCTACGTCGCCAAGTACACGATCAACCCGGCGATCGCCAACGGCATCGC
GCACGAGGTCGGTTCGGTCGAGATCGGCAAGTGGGCCGACCTGGTGCTGTGGCGGCCGGCCTTCTTCGGCGTCAAGCCGA
GCCTGGTGCTGAAGGGCGGCTTCATCGCCGTCGCGGCGATGGGCGACCCGAACGCCAGCATCCCGACGCCCCAGCCGGTG
CATTACCGGCCGATGTTCGGCAGCTTCGGCGGCGCGCGTGCCGCGACCTCGCTGACCTTCGTCAGCCAGGCGGCGCTGCA
GGCCGAGATCGGCGACCAGCTGGGCCTGGCCAAGCGCCTGGCCGCGGTGCAGGGCTGCCGCCAGGTTAAGAAGGGCGACA
TGGTGCACAACGGCTGGCTGCCGAAGATGGAGATCGACCCGCAGACCTACGAGGTGCGGGCCGACGGCCAGCTGCTGACC
TGCGAGCCGGCGACCGTGCTGCCGCTCGCGCAGAAGTACTTCCTGTTCTGA

Protein sequence :
MSTSIGRRAYAEMYGPTLGDRVRLADTELIVEVEADYTLRAGGYGEEVKFGGGKTIRDGMGQGQAVNGPGHHEAADCVIT
NALIIDHWGIVKADIGLKGCRIAAIGKAGNPDVQPGVDIVIGPGTEIIAGEGMIVTAGGIDSHIHFICPQQIDEALNSGV
TTMLGGGTGPATGTFATTCTPGPENLHRMLQAADAFAMNLGFLGKGNASRPEALSQQIAAGAIGLKLHEDWGTTPSAIDN
CLDIAEATDTQVSIHSDTLNESGFVEDTIAATKGRTLCAFHTEGAGGGHAPDILRVAGEPNFLPSSTNPTMPYTANTVDE
HLDMLMVCHHLDAGIAEDLAFAESRIRRETIAAEDVLHDLGAISMMSSDSQAMGRVGEVIIRTWQTAHKMKVQRGALAGD
NARNDNQRVKRYVAKYTINPAIANGIAHEVGSVEIGKWADLVLWRPAFFGVKPSLVLKGGFIAVAAMGDPNASIPTPQPV
HYRPMFGSFGGARAATSLTFVSQAALQAEIGDQLGLAKRLAAVQGCRQVKKGDMVHNGWLPKMEIDPQTYEVRADGQLLT
CEPATVLPLAQKYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 2e-168 68
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 2e-168 68
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-155 60
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-155 60
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-155 60
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-155 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_005438844.1 urease subunit alpha UreC VFG0270 Protein 5e-148 60