|
Name : serS (RGE_35310) Accession : YP_005438369.1 Strain : Rubrivivax gelatinosus IL144 Genome accession: NC_017075 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase SerS Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 3776392 - 3777684 bp Length : 1293 bp Strand : - Note : protein synonym:serine--tRNA ligase DNA sequence : ATGCTCGACATCACCCTGCTGCGCCGCGACCTCGCGAGCGTCGTCGCCCGTCTCGAAAAGCGCCGTGCGCCGCAACCTTT CCTCGACGTCGAACGCTTCACCGCGCTCGAAGCCGAACGCAAGCGCATCCAGACGCGCACCGAGGAGCTGCAGTCGCGGC GCAACCAGCTGTCCAAGCAGATCGGCCAGGCCAAGGGCCGCGGCGAGGACGCCTCGGCGCTGATGGCCGAGGTCGGCGGC ATCGGCGACGAGCAGAAGGCCGGCGCCGAGCGCCTGGAAGCCATCCAGGCCGAGCTGCAGCAGATGCTGATGTCGATTCC GAACCTGCCGCAGGACAGCGTGCCGGTCGGTGCCGACGAGAGCGGCAACGTCGAGGTGCGCCGCTGGGGCACGCCGCGCA CGTTCGAGTTCACGCCCAAGGACCACGTCGACGTCGGCCAGGCGCTGGGCCTGGACTTCGACACCGGCGCCAAGCTCGCC GGCTCGCGCTTCACCTTCCTGCGCGGCCCGGCCGCGCGCCTGCACCGCGCGCTCGCCCAGTTCATGCTGGACACGCAGAC CCAGGAGCACGGCTACACCGAGTGCTGGACGCCGTACATCGTCAACCGCGAGGTGCTCGAAGGCACCGGGCAGCTGCCCA AGTTCAAGGAGGACATGTTCTGGGTGCTGCGCGGCGGTGACGAGGAGCAGCGCGAGCAGTATCTGATCTCGACCTCGGAG ATCCCGCTGACGAACACCGTGCGCGAGCAGATCCTCGACGCCGCGGCGCTGCCGATCAAGCTGACGGCGCACAGCCCCTG CTTCCGCTCGGAAGCCGGCAGCGCCGGGCGCGACACGCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTCGAGATGG TGCAGATCGTGCGCCCCGAAGACAGCGACGCCGCGCTGGAGCAGATGGTCGGCCATGCCGAGGCCATCCTGCAGAAGCTG GAGCTGCCGTACCGTGTGATCACGCTGTGCACCGGCGACATGGGCTTCGGCTCGGCCAAGACCTACGACCTGGAGGTCTG GCTGCCGGCGCAGGGCACCTACCGCGAGATCAGCTCGTGCAGCAACTGCGAGGCCTTCCAGGCGCGGCGCATGCAGGCGC GCTTCCGCAACGCGCAGGGCAAGACCGAGTTCGTGCACACACTCAACGGCTCGGGCCTGGCGGTCGGGCGCGCGCTGGTG GCGGTGCTGGAAAACCATCAGCAGGCCGACGGTTCGATCCGTGTGCCGGCGGCTTTGCGGCCTTATCTAGGCGGCGCCGA AATCCTGCGCTAG Protein sequence : MLDITLLRRDLASVVARLEKRRAPQPFLDVERFTALEAERKRIQTRTEELQSRRNQLSKQIGQAKGRGEDASALMAEVGG IGDEQKAGAERLEAIQAELQQMLMSIPNLPQDSVPVGADESGNVEVRRWGTPRTFEFTPKDHVDVGQALGLDFDTGAKLA GSRFTFLRGPAARLHRALAQFMLDTQTQEHGYTECWTPYIVNREVLEGTGQLPKFKEDMFWVLRGGDEEQREQYLISTSE IPLTNTVREQILDAAALPIKLTAHSPCFRSEAGSAGRDTRGMIRQHQFDKVEMVQIVRPEDSDAALEQMVGHAEAILQKL ELPYRVITLCTGDMGFGSAKTYDLEVWLPAQGTYREISSCSNCEAFQARRMQARFRNAQGKTEFVHTLNGSGLAVGRALV AVLENHQQADGSIRVPAALRPYLGGAEILR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-101 | 54 |
