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Name : gabD (RGE_34990) Accession : YP_005438337.1 Strain : Rubrivivax gelatinosus IL144 Genome accession: NC_017075 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NADP+) GabD Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 3741948 - 3743417 bp Length : 1470 bp Strand : + Note : - DNA sequence : ATGACGTCCCCGCTGGCGCAACTGAAGGACCCCTCGCTGCTGAAGAGCGGCGGCCTCGTCGACGGCGAATGGATCGCCGG CAGCACGAGCTTCGCCGTGCACGACCCGGCCACCGGCGCCGAGCTGGCGCAGGTCGCCAACCTCGGCGCGACCGACTGCG CCGCCGCCATCGCCGCCGCCGAACGCGCCTGGCCCGTCTGGCGCGCCAAGACCGCCAAGGAACGCGGCGCGGTGCTGATG CGCTGGTTCGCGCTGCTGCACCAGAACGCCGACGACCTGGCGCGGCTGATGACCGCCGAACAGGGCAAGCCGCTGGCCGA AGCGCGTGGCGAAGTGACCTACGGCGCCAGCTTCATCGAGTGGTTCGCCGAGGAGGCGCGCCGCGTCTACGGCGAGACCA TCCCGACCACCGACGGCAACAAGCGCTATCTGGTGATCCGCCAGCCGGTCGGCGTCTGCGCGGCGATCACGCCCTGGAAC TTCCCCATCGCGATGATCACGCGCAAGGTCGCGCCGGCGCTGGCCGCCGGCTGCCCGGTGATCGTCAAGCCGGCCGAGCA GACGCCGCTGTCGGCGCTGGCCGTGGCCGAGCTGGCGCAGCGCGCCGGCATGCCCGCCGGCGTCTTCAACGTGCTGCCGG CCGACGCCGCGAACTCGATCGAGATCGGCAACGTGCTGTGCTCCAGCGACGTCGTGCGCCACCTGTCCTTCACCGGCAGC ACCGAGGTCGGCCGCATCCTGATGAAGCAGTGCGCGCCGACGATCAAGAAGCTGTCGCTGGAACTCGGCGGCAACGCGCC GTTCATCGTCTTCGACGACGCCGACCTGGACAGCGCCGTCGAAGGCGCGCTGGTCAGCAAGTACCGCAACGCCGGCCAGA CCTGCGTCTGCGCCAACCGCCTGTACGCCCAGGCCGGCATCCACGACGCCTTCGTCGAGAAGCTGGCGGCGCGTGCGCGC CAGATCGCCGTCGGCAACGGTTTCGACGCCGGCGTGCAGCTGGGGCCGCTGATCGACGATCAGGCGATGGCCAAGGTCGA GGCCCATGTCGCCGACGCGCTGGCGCAGGGCGCGCGCTTGGTGACCGGCGGCGAACGTGTCGGCGACCGCTTCTATGCGC CGACGGTGCTGGCCGACGTGACGCCGGCGATGCGCTGCTCGAAGGAAGAGACCTTCGGCCCGATCGCGCCGGTCATCAGG TTCGAGACCGAGGCCGAGGCCGTCGAGCTGGCCAACGCCACCGAGTTCGGCCTGGCGAGCTATTTCTACAGCCGCGACAT CGGCCGCATCTGGCGCGTCTCGGAGGCGCTGGAGTACGGCATGGTGGGCGTCAACACCGGCCTGATCTCGACCGCCGAGG TGCCGTTCGGCGGCGTCAAGCAGTCGGGCCTGGGCCGCGAAGGCGCGCGCCAGGGCATCGACGACTATCTCGAGAGCAAG TACGTCTGCCTGGGCGACATCCTGAAGTAA Protein sequence : MTSPLAQLKDPSLLKSGGLVDGEWIAGSTSFAVHDPATGAELAQVANLGATDCAAAIAAAERAWPVWRAKTAKERGAVLM RWFALLHQNADDLARLMTAEQGKPLAEARGEVTYGASFIEWFAEEARRVYGETIPTTDGNKRYLVIRQPVGVCAAITPWN FPIAMITRKVAPALAAGCPVIVKPAEQTPLSALAVAELAQRAGMPAGVFNVLPADAANSIEIGNVLCSSDVVRHLSFTGS TEVGRILMKQCAPTIKKLSLELGGNAPFIVFDDADLDSAVEGALVSKYRNAGQTCVCANRLYAQAGIHDAFVEKLAARAR QIAVGNGFDAGVQLGPLIDDQAMAKVEAHVADALAQGARLVTGGERVGDRFYAPTVLADVTPAMRCSKEETFGPIAPVIR FETEAEAVELANATEFGLASYFYSRDIGRIWRVSEALEYGMVGVNTGLISTAEVPFGGVKQSGLGREGARQGIDDYLESK YVCLGDILK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-137 | 60 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 4e-85 | 42 |
