Gene Information

Name : RGE_32600 (RGE_32600)
Accession : YP_005438098.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3479961 - 3481193 bp
Length : 1233 bp
Strand : -
Note : -

DNA sequence :
TTGAAGCCCATCGCCAAGTCCAGCAAGCTCGCCAACGTCGGTTACGACATCCGCGGTCCGGTGCTCGACAAGGCCCGGCA
GATGGAGGAGGAGGGCCAGCGCATCATCAAGCTGAACATCGGCAACGTCGCCGCCTTCGGCCTGATGCCCCCCGACGAGA
TCGTCCGGGACATGATCCACAACCTGCCGTCGCAGGTGGCCGCCGGCTACACCGACAGCAAGGGCCTGTTCGCGCCGCGC
AAGGCGGTCGTGCACTACACCCAGGAAAAGCGCATCTCCGGCGTGACCGTCGACGATGTCTACCTGGGCAACGGCGCCTC
CGAGCTGATCGCGATGAGCATGAACGCCTTGCTCGACGCCGGTGACGAGGTGCTGATTCCCTCGCCCGACTACCCGCTGC
ACACCGCGGTGGTGTCGCTGTCGGGCGGCACGCCGGTGCACTACCGCTGCGACGAAGGCTCGGGCTGGCTGCCCGACCTC
GACGACATCCGCGCCAAGGTGAGCGCCAACACCAAGGCCATCGTCGTCATCAACCCGAACAACCCGACGGGCGCGCTCTA
TCCGGTGGACCTGCTGAAGGACATCGTCGAGATCGCGCGCCAGCACCAGCTGATCGTCTTCGCCGACGAGATCTACGACA
AGACGCTGTACGACGGCAACGAGCACACCAGCATCGCCTCGCTGGCCGACGACGTGCTCTTCGTCACCTTCAACGGCCTG
TCCAAGAACTACCGCTCCTGCGGCTACCGCTCGGGCTGGATGGTGGTCTCCGGCGAGAAGCGCTACGCCAAGGACTACAT
CGAGGGCCTGAACATGCTGGCCTCGATGCGGCTGTGCGCCAACACGCCCGGCCAGATGGCGATCCAGACCGCGCTCGGCG
GCTACCAGAGCATCAAGGACCTCGTCGCCCCGGGCGGCCGGCTGCTCAAGCAGCGCGACCTCGCCTGGGAGATGATGAAC
GCGATCCCCGGCGTCAGCGTCGTCAAGCCGAAGGCGGCGCTGTACATGTTCCCGCGGCTGGACCCCAAGGTCTACCCGAT
CGCCGACGACCAGCAGTTCGCCTACGAGCTGCTGGAGCAGGAGCGTGTGCTGATCGTGCAGGGCACCGGCTTCAACTGGC
CCGACCCCGACCACTTCCGCCTCGTCTTCCTGCCCAACCTCGACGACCTGACCGAGGCCATCGGGCGCATCGAGCGCTTC
CTCGCCGGCTATCGCAAACGCCACTCCCTTTAA

Protein sequence :
MKPIAKSSKLANVGYDIRGPVLDKARQMEEEGQRIIKLNIGNVAAFGLMPPDEIVRDMIHNLPSQVAAGYTDSKGLFAPR
KAVVHYTQEKRISGVTVDDVYLGNGASELIAMSMNALLDAGDEVLIPSPDYPLHTAVVSLSGGTPVHYRCDEGSGWLPDL
DDIRAKVSANTKAIVVINPNNPTGALYPVDLLKDIVEIARQHQLIVFADEIYDKTLYDGNEHTSIASLADDVLFVTFNGL
SKNYRSCGYRSGWMVVSGEKRYAKDYIEGLNMLASMRLCANTPGQMAIQTALGGYQSIKDLVAPGGRLLKQRDLAWEMMN
AIPGVSVVKPKAALYMFPRLDPKVYPIADDQQFAYELLEQERVLIVQGTGFNWPDPDHFRLVFLPNLDDLTEAIGRIERF
LAGYRKRHSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-116 58
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-116 58
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-116 58
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 4e-116 58