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Name : kdsB (RGE_32020) Accession : YP_005438040.1 Strain : Rubrivivax gelatinosus IL144 Genome accession: NC_017075 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) KdsB Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 3412287 - 3413030 bp Length : 744 bp Strand : + Note : - DNA sequence : GTGAGCTTCACGGTCCTGATCCCGGCGCGCCTGGCCTCCACGCGCCTGCCGCGCAAGCCGCTGGCCGACATCGGCGGCCT GCCGATGATCGTGCGCGTCGCGCGCCGCGTCGCCGATGCCGGCGCCGAGCGCATCGTCGTCGCCTGCGACGACGCCGACA TCGCCGCCGCCTGCGCCGCGCACGGCGTCGAGGCGGTGCTGACACGCGCCGACCACCCGAGCGGCAGCGACCGCCTGGCC GAGGCCTGCACGCGGCTGGGCCTGGACGGCTCGGCGCGCATCGTCAACGTGCAGGGCGACGAGCCGCTGATCGACCCGGC GCTGGTGCGCCGCTGCGCCGAGCTGCTCGACGAGCGGCCCGACTGCGTGATGAGCACCGCGGCGCACGCCATCGCCTCGG CCGAGGACTTCGCCAACCGTAACGTCGTCAAGGTCGTGCTCGACGCCGCCGGACGCGCGCTGTACTTCAGCCGCTCGGCC ATCCCCTGCTGGCGCGACGGTGCGCCGGGCACGCTGCCCGACCCGGCACCGCTGCGCCACGTCGGCCTCTACGGCTACCG CGCCGGCTTTCTGCGCCGCTTCCCGACGCTGGAGCCGGCACCGCTGGAACGCCTGGAGTCGCTGGAGCAGCTGCGCGTGC TGTGGCACGGCGAACGCATCGCGGTGCACGTCGCCGAACATGCTCCAGGCACCGGCGTCGACACGCCCGAAGACCTGGAA CGCGTGCGCGCGCTCTTCGCCTGA Protein sequence : MSFTVLIPARLASTRLPRKPLADIGGLPMIVRVARRVADAGAERIVVACDDADIAAACAAHGVEAVLTRADHPSGSDRLA EACTRLGLDGSARIVNVQGDEPLIDPALVRRCAELLDERPDCVMSTAAHAIASAEDFANRNVVKVVLDAAGRALYFSRSA IPCWRDGAPGTLPDPAPLRHVGLYGYRAGFLRRFPTLEPAPLERLESLEQLRVLWHGERIAVHVAEHAPGTGVDTPEDLE RVRALFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-24 | 43 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-24 | 43 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-24 | 43 |
