Gene Information

Name : RGE_30030 (RGE_30030)
Accession : YP_005437841.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Virulence
Product : putative AlpA family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3189633 - 3189848 bp
Length : 216 bp
Strand : -
Note : -

DNA sequence :
ATGCCAGCCCGACCCCACCACGATGCCGCCGATGTCCCGGTCTTCCTGCGCCTGCCGCGGGTGCGCCACCTCACCGGCCT
GGGCAAGAGCACGATCTACCGCCTGATCGCGCTCGACGAGTTCCCGCGGCCGGTGCAACTGGGCCAGCGTGCGGTGGGCT
GGCGCTCGGCCGACGTCGAGCGCTGGAGCGCCGAGCGGCCGATGGCGCCGCGCTGA

Protein sequence :
MPARPHHDAADVPVFLRLPRVRHLTGLGKSTIYRLIALDEFPRPVQLGQRAVGWRSADVERWSAERPMAPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 2e-09 51
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 5e-08 43
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 5e-08 43
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 3e-08 43
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 5e-07 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RGE_30030 YP_005437841.1 putative AlpA family transcriptional regulator VFG1141 Protein 1e-08 43