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Name : dnaB (RGE_27160) Accession : YP_005437554.1 Strain : Rubrivivax gelatinosus IL144 Genome accession: NC_017075 Putative virulence/resistance : Unknown Product : replicative DNA helicase DnaB Function : - COG functional category : - COG ID : - EC number : 3.6.4.12 Position : 2877070 - 2878479 bp Length : 1410 bp Strand : - Note : - DNA sequence : ATGTCCGCGCTGTTCGAATCCCGAGGTTCCTCCGTTCCCGACGACGAGGTCGCCCGCCTGCGCGTGCCGCCGCACTCGAA CGAAGCCGAGCAGAGCGTGCTCGGCGGCCTGCTGATCGACAACCTGTCCTGGGACCGCGCCGCCGACCTGCTGACCGACA GCGACTTCTACCGCTTCGAGCACAAGCTGATCTTCAGCGCCATCTCGACGCTGGTGAACCAGAGCAAGCCGGCCGACGTC ATCACCGTCTTCGAGCAGTTGCAGAGCCTGGGCAAGGCCGAGGACTGCGGCGGCCTGGCCTATCTCAACGCGCTGGCGCA GAGCGTGCCGAGCGCGGCCAACATGCGGCGCTACGCCGAGATCGTCCGCGAGCGCGCGATCCTGCGAAAGCTGATCGCCG CCAGCGACGAGATCGCCACCAACGCCTTCAACCCGCAGGGCCGGCCGGTCAGCAGCATCCTCGACGAGGCCGAAGGCAAG ATCTTCAAGATCGGCGAAGAAGGCTCGCGCCAGAAGCAGGGTTTCCTGGGCATCGACAAGCTGGTCGTCGACCTGATCGA CCGCGTGCAGGAACTGCACGACAACGGCGCCGAGGAAGTGACCGGCGTGCGCACCGGCTTCTTCGACATGGACCGCATGA CCGCGGGCCTGCAGAAGGGCGACCTGATCATCCTCGCGGCGCGGCCCTCGATGGGCAAGACCGCGTTCGCGCTGAACATC GCCGAGAACGTCGCCGTCGCCGAGGGGCTGCCGGTGCTCGTGTACTCGATGGAAATGGGCGCCTCGCAGCTGGCGCTGCG TCTGGTCGGCTCGCTGGGCCGCATCGACCAGCAGAACCTGCGCACCGGCCGTTTGCGCACCGAGGAATGGGAGCGCCTGA CCGAGGCCGTCGACAAGCTCGGCCAGGTGCAGCTCTTCATCGACGAGACGCCGGCGCTGACCGCGCCCGAACTGCGCGCC CGCGCGCGCCGCATGGCGCGCCAGTACGGCCAGCTCGGGCTGATCGTCATCGACTACCTGCAGCTGATGAGCGGCTCGTC GGCCAGCAACGGCGAGAACCGCGCCACCGAGATCGGCGAGATCTCGCGGGGCCTGAAGGCGCTGGCCAAGGAACTGCAGT GCCCGGTGATCGCGCTGTCGCAGCTCAACCGCTCGGTCGAAACACGGACCGACAAGCGGCCGATGATGAGCGACTTGCGC GAGTCGGGCGCCATCGAGCAGGACGCGGACATCATCATGTTCATCTACCGCGACGAGTACTACAACAAGGACAGCAAGGA CCCGGGCGTCGCGGAAGTCATCATCGGCAAGCAGCGTAACGGCCCGGTCGGCACCGTGCGCCTGGCCTTCCTGAAGCCGC TGACCAAGTTCGAGAACCTCGCCCCCGACGCCATGTCGTCGGAGTACTGA Protein sequence : MSALFESRGSSVPDDEVARLRVPPHSNEAEQSVLGGLLIDNLSWDRAADLLTDSDFYRFEHKLIFSAISTLVNQSKPADV ITVFEQLQSLGKAEDCGGLAYLNALAQSVPSAANMRRYAEIVRERAILRKLIAASDEIATNAFNPQGRPVSSILDEAEGK IFKIGEEGSRQKQGFLGIDKLVVDLIDRVQELHDNGAEEVTGVRTGFFDMDRMTAGLQKGDLIILAARPSMGKTAFALNI AENVAVAEGLPVLVYSMEMGASQLALRLVGSLGRIDQQNLRTGRLRTEEWERLTEAVDKLGQVQLFIDETPALTAPELRA RARRMARQYGQLGLIVIDYLQLMSGSSASNGENRATEIGEISRGLKALAKELQCPVIALSQLNRSVETRTDKRPMMSDLR ESGAIEQDADIIMFIYRDEYYNKDSKDPGVAEVIIGKQRNGPVGTVRLAFLKPLTKFENLAPDAMSSEY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-95 | 52 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-78 | 47 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-79 | 47 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-79 | 47 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 9e-74 | 46 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-80 | 46 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 9e-81 | 46 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-77 | 43 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-61 | 41 |
