Gene Information

Name : aldH (RGE_26320)
Accession : YP_005437470.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Virulence
Product : gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase AldH
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.-
Position : 2775196 - 2776692 bp
Length : 1497 bp
Strand : +
Note : -

DNA sequence :
ATGAACAACCCGACCCCGAACTGGCGCGAACGCGCCGCGGCGCTGGCCCTCGACGGCCGTGCGCTCGTCGACGGCCAGCG
TGTCGCCGGCGTCTCCGGCGAGACCTTCGAGAAGCGCTCGCCGATCGACGGCCGCCGCCTGGGCGACGTCGTGCGCGGCC
GTGCCGAGGACGTGGACCGCGCGGTGGCCGCCGCCCGCGCGGCCTTCGACGACCGCCGCTGGGCCGGCAAGGCGCCGGCG
GTGCGCAAGAAGATCCTGCAGCGTTTCGCCGACGGCATCCTCGCCGCCAAGGAGGAGCTGGCCCTGCTCGAGACGCTGGA
CATGGGCAAGCCGATCCGCTGGTCGCTGGCGGTCGACGTGCCGGCGACGGCACGCTGCATCACCTGGTACGCCGAGGCGG
TGGACAAGGTCTACGACGAGATCGCGCCGACCGCCGACAACGCGCTGGCGCTGATCACGCGCGAGCCGATGGGCGTCGTC
GGGGCGATCGTGCCTTGGAACTACCCGATGATCATGGCCGCCTGGAAGCTCGGGCCGGCGCTGGCGGCGGGCAACTCGGT
GGTCTTGAAGCCCAGCGAGAAGAGCCCGTTCACCGCGCTGCGCCTGGCCGAGATCGCCATCGAGGCCGGGCTGCCGCCGG
GGGTCTTCAACGTCGTGCCGGGCTACGGCGGCGAAGCCGGCGAGGCACTGGCGCTGCACCCCGACGTCGACGCGATCGGC
TTCACCGGCAGCACGCGCATCGGCCGGCGCATGCTGGAGTACGCGGGGCGCTCGAACCTGAAGCGCGTCTACAACGAGCT
GGGCGGCAAGTCGGCCTTCCTCGTCTTCCCCGACGCCGACCTGGGCCGCGCCGCCGAGACGGTGGCCGACAGCATCTTCT
TCAACCAGGGCGAGAGCTGCAACGCGCCCTCGCGCCTGCTGGTGCACGACAGCATCGCCGACGAGTTCGCCGCGCGCGTG
GCGGCGCTGGCGCCCAAGTACACGCCGGCCGACCCGCTGGACCCGGCCACGGTGATGGGGGCGCTGGTCGACGAGCAGCA
GATGTCCACCGTGCTCGGCTACATCGACGCCGGCCTCGCCGAAGGCGCGAGCTGCCTGGCCGGCGGCCGCCGCGCGCGCG
CCGACAGCGGCGGCTTCTACGTCGAGCCGACGGTCTTCGCCGGCGTGACGAACACGATGCGCATCGCGCGCGAGGAGATC
TTCGGCCCGGTGCTGTCGGTGCTGCGCTTCGCCGACGAGGCCCAGGCGGTGGCGATGGCCAACGCCAGCGCCTACGGCCT
GCAGGCCAGCGTCTGGAGCGACAACGTGCACCGCGCGCACCGCGTCGCGCGTGCGCTGCGTGCCGGCACCGTGCACGTCA
ACCAGTACGACGAGGACGACATGACCGTCCCGTTCGGCGGCTACAAGCAAAGCGGCAACGGCCGCGACAAGAGCCTGCAC
GCCTTCGACAAGTACACCGAGCTGAAGACCACCTGGCTGCGCATCAACCCGGCATGA

Protein sequence :
MNNPTPNWRERAAALALDGRALVDGQRVAGVSGETFEKRSPIDGRRLGDVVRGRAEDVDRAVAAARAAFDDRRWAGKAPA
VRKKILQRFADGILAAKEELALLETLDMGKPIRWSLAVDVPATARCITWYAEAVDKVYDEIAPTADNALALITREPMGVV
GAIVPWNYPMIMAAWKLGPALAAGNSVVLKPSEKSPFTALRLAEIAIEAGLPPGVFNVVPGYGGEAGEALALHPDVDAIG
FTGSTRIGRRMLEYAGRSNLKRVYNELGGKSAFLVFPDADLGRAAETVADSIFFNQGESCNAPSRLLVHDSIADEFAARV
AALAPKYTPADPLDPATVMGALVDEQQMSTVLGYIDAGLAEGASCLAGGRRARADSGGFYVEPTVFAGVTNTMRIAREEI
FGPVLSVLRFADEAQAVAMANASAYGLQASVWSDNVHRAHRVARALRAGTVHVNQYDEDDMTVPFGGYKQSGNGRDKSLH
AFDKYTELKTTWLRINPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-97 60
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-57 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 7e-58 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-57 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-57 43
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-57 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-56 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldH YP_005437470.1 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase AldH VFG0082 Protein 2e-57 43