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Name : clpV (RGE_25700) Accession : YP_005437408.1 Strain : Rubrivivax gelatinosus IL144 Genome accession: NC_017075 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : - COG ID : - EC number : - Position : 2704453 - 2707116 bp Length : 2664 bp Strand : - Note : - DNA sequence : ATGCCCGACAAGCTCAAGACCCTGATTGCCAAACTCGACGACGGCTGCCGGCGTGCTGCCGAGCGCGCCGCCAGCCTGTG CCTGGCGCGCGGCCACTACGAGGTGGATGTCGAACACATCTTCCTGGCCCTGCTGGAACAGCCGCAGAGTGACCTTGCGC TGATCTGCAGGCGCCACGACGTGTCTACCAGCGCACTGCAGCGAGATTTGGAGGCCGAACTGGCGAGGCTTCGAAGCGGC AACACGCGCACGCCGGTGTTCAGTCCGCGCGTGCCTGTGCTGCTGGAACATGCCTGGCTCGTGGCGTCGCTCGACTCACA TCTGCCGCGCATCCGCAGTGCGCACCTGCTGCTGGCCTTGCTGACCGAGTCGTCGCTCGCACAAGTCGCCCAGCGAGCCA GCAGTCATTTCGCGCGCTTTCGGGTCGACGACCTGAAGCACCGCCTGGCCGAGCTGACCGACGGCTCAGCCGAATCCGAC GGCGCCGTGCGCGTACCCGATGCAGCAGCCGGCGGCGAGCCCGCCTTGGCGGGCCGGACGCCGGCACTGGACCAGTTCAC CACCGACCTCACGCAACGCGCTGCTGCGGGCCGGCTCGATCCGGTGATCGGCCGAGACGCCGAGATCCGTCAGGTCATCG ACATCCTGATGCGCAGACGCCAGAACAACCCCATCCTCACCGGCGAGGCGGGTGTCGGCAAGACGGCCGTGGTGGAGGGG CTGGCACTGCGCATCGCCGCGGGGGACGTGCCGCCTGCGCTGCAGGGCGTGAGCCTGCATGTGCTGGATCTGGGCCTGCT GCAGGCCGGCGCCAGCGTCAAGGGCGAGTTCGAGAACCGCCTGAAGACCGTGATCGACGAGGTCAAGAAGAGCCCGCATC CCGTCATCCTGTTCATCGACGAAGCGCACACGATGATCGGCTCCGGCGGCACCGCCGGCCAGAACGACGCCGCCAACCTG CTGAAGCCCGCGCTGGCCCGGGGCGAGCTGCGCACCGTCGCCGCGACCACGTGGAGCGAGTACAAAAAGTACTTCGAGAA AGACGCCGCGCTCGCCCGCCGCTTCCAGGTCGTGAAGGTCGAGGAGCCGAGCGAGCCCATCGCCGCAGCGATGCTGCGCG GCATGGCAGCGCTGATGGAGCAGCACTTCAAGGTCCGCGTGCTCGACGAGGCCGTAACTGAAGCCGTGCGGCTTTCGGCG CGCTACATCAACGGCCGGCAACTGCCCGACAAGGCGATCGGTGTGCTGGATACCGCGTGTGCAAAGGTCGCACTGGGGCA GAGTTCGACGCCGGCACCGATCGAGGACGCCGCGCGCCGCATCGAGCGGCTCGATGCCGAAGCCGTCGCGCTGCGGCGTG AAGCCGCCGCCGGCGCCGACCACGAGGCGAAGCTGGCCGAACTGGCCGCCAAGCGCGACTCGGTGCAGGCGGACCTGGAC GCGCTCAAGACCCGCTTCGAGGCCGAGAAGGCGTTGGTCGCCGAGATCCAGGCGCTGCGTGCGGAGCTGGAAGCCGCGCC TCCATGTGCGGCCGATCCGGCGGCCAGGAAGAAGAGCGCGAAGAAGCCCGGCGCCGGGCCCACCGCCCTGCACGCCCGCC TCGACGAGCTCGCGGCGCTGCAAGGCGAGACCCCGCTGGTGCCGATGCAGGTCGACGGGCTGGTCGTCGCCGAGATCGTC TCCGCCTGGACCGGCATCCCGCTGGGCAAGATGGTCAGGAACGAGATCGCCACCGTCATGAACCTGAAGGCGCTGCTCCA GGAGCGCGTCATCGGCCAGGACCACGCGCTCGCCGCCGTCGCCCAGCGCGTGCGCACCGCGCGCGCCAACCTCGAAGACC CGGGCAAGCCCAAGGGCGTGTTCCTGTTCGTCGGGCCCAGTGGCGTCGGCAAGACCGAGACCGCGCTCGCCCTCGCTGAC CTGCTCTACGGCGGCGAGAGAAAGCTTGTGACTATCAACATGAGCGAGTACCAGGAGGCGCACTCAGTCAGCGGCCTCAA GGGCAGCCCGCCAGGCTACGTCGGCTACGGCGAGGGCGGTGTGCTCACCGAGGCCGTACGCCGCAACCCGTACAGCGTGG TGCTGCTCGACGAGGTGGAGAAGGCCCACCCTGACGTGCTGGAGCTCTTCTTTCAGGTCTTCGACAAGGGCGTGCTCGAA GACGCCGAAGGTCGCGAGGTCGACTTCCGCAACACGATCATCGTCCTCACGAGCAACGTCGGCTCCAGCCAGATCATGCA GGCCTGCCTGAACAAGGCACCGGCCGATTTGCCAGCGGCCGATGCGCTGGCCGAGGCGCTGCGCCCGGTTCTGTACAAGA GCTTCAAGCCTGCGTTCCTGGGACGTCTGAAGGTGGTGCCCTTCTACCCTATCGGCGACGCCGTGCTGGAGCAGATCATC CGCCTCAAGCTCGACCGCATCGCGCGCCGCGTAGCCGGCAACCACCGGGCCGACTTCCGGTATGACGACAAGCTGGTCGA GGCGGTTCTCGCGCGCTGCACCGAGGTCGACACCGGCGCCCGCAACATCGACCACATCCTCAACGGCACGCTGCTGCCCG AGGTGGCCGAGCAGGTGCTGGCCCGCATGGCCGACGGCACGGCGATCGAGCGCATCAAGGTCACCGCGGTGCGCAACGGC GACTTCCGTTATGCGGTCAGCTAG Protein sequence : MPDKLKTLIAKLDDGCRRAAERAASLCLARGHYEVDVEHIFLALLEQPQSDLALICRRHDVSTSALQRDLEAELARLRSG NTRTPVFSPRVPVLLEHAWLVASLDSHLPRIRSAHLLLALLTESSLAQVAQRASSHFARFRVDDLKHRLAELTDGSAESD GAVRVPDAAAGGEPALAGRTPALDQFTTDLTQRAAAGRLDPVIGRDAEIRQVIDILMRRRQNNPILTGEAGVGKTAVVEG LALRIAAGDVPPALQGVSLHVLDLGLLQAGASVKGEFENRLKTVIDEVKKSPHPVILFIDEAHTMIGSGGTAGQNDAANL LKPALARGELRTVAATTWSEYKKYFEKDAALARRFQVVKVEEPSEPIAAAMLRGMAALMEQHFKVRVLDEAVTEAVRLSA RYINGRQLPDKAIGVLDTACAKVALGQSSTPAPIEDAARRIERLDAEAVALRREAAAGADHEAKLAELAAKRDSVQADLD ALKTRFEAEKALVAEIQALRAELEAAPPCAADPAARKKSAKKPGAGPTALHARLDELAALQGETPLVPMQVDGLVVAEIV SAWTGIPLGKMVRNEIATVMNLKALLQERVIGQDHALAAVAQRVRTARANLEDPGKPKGVFLFVGPSGVGKTETALALAD LLYGGERKLVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLELFFQVFDKGVLE DAEGREVDFRNTIIVLTSNVGSSQIMQACLNKAPADLPAADALAEALRPVLYKSFKPAFLGRLKVVPFYPIGDAVLEQII RLKLDRIARRVAGNHRADFRYDDKLVEAVLARCTEVDTGARNIDHILNGTLLPEVAEQVLARMADGTAIERIKVTAVRNG DFRYAVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 9e-144 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV | YP_005437408.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 6e-180 | 52 |
| clpV | YP_005437408.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 3e-142 | 45 |
