Gene Information

Name : RGE_24160 (RGE_24160)
Accession : YP_005437256.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2547151 - 2547834 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGATCCGATCATCTCCGTCCAACGCATCTCGAAGCAGGTCGCCGATTCGACCGGCACGCTGACGATTCTCCACGA
CATCGATTTCGCGCTCTTTCCGAAGGAGACCGTGGCCATCGTCGGTGCCTCGGGCTCGGGCAAGAGCACGCTGCTGGCCA
TCCTGGCCGGCCTGGACACACCCACGGCGGGCACGGTGACGCTGGCCGGCACCGACCTGTTCGCGCTCGACGAAGACGCC
CGCGCCGCGCTGCGTGCGCGCCAGGTCGGCTTCGTCTTCCAGAACTTCCAGCTGCTGGGCCATCTGACGGCGCTGGAGAA
CGTGATGCTGCCGCTGGAGCTGATGGGCCGGCGCGACGCACGCGCCGCGGCTGCCGAGATGCTGGCGCGTGTCGGCCTCG
GCGAGCGCCTGGCGCACTACCCGAAGCTGCTGTCCGGCGGCGAGCAGCAGCGTGTCGCGCTGGCGCGCGCCTTCGTCGTG
CGCCCGGCGGTGCTGCTGGCCGACGAGCCCACCGGCAGCTTGGACTTCGCCACCGGCGCCAAGGTGATGGAGCTGATGTT
CGAACTCAACCGCGAAGCCGGCACGACGCTGGTGCTCGTCACCCACGACCCGCAGATCGCCGCCCGCTGCGAGCGCCAGC
TGCGCATCGACGCCGGGCGGGTGGCGGAGGCGGCGGCGGCCTGA

Protein sequence :
MSDPIISVQRISKQVADSTGTLTILHDIDFALFPKETVAIVGASGSGKSTLLAILAGLDTPTAGTVTLAGTDLFALDEDA
RAALRARQVGFVFQNFQLLGHLTALENVMLPLELMGRRDARAAAAEMLARVGLGERLAHYPKLLSGGEQQRVALARAFVV
RPAVLLADEPTGSLDFATGAKVMELMFELNREAGTTLVLVTHDPQIAARCERQLRIDAGRVAEAAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-19 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RGE_24160 YP_005437256.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-27 50
RGE_24160 YP_005437256.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-32 44
RGE_24160 YP_005437256.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-29 42