Gene Information

Name : RGE_23080 (RGE_23080)
Accession : YP_005437148.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Resistance
Product : putative transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2424035 - 2425696 bp
Length : 1662 bp
Strand : -
Note : -

DNA sequence :
GTGCTTCGACGTCTGCTGTCCCTGCGGCTCAATCCGGTGCAACTGGGCTGGGTCGCCGCGCTCTTCTTCGCCAGCTTCGG
CAACCTCGTGCTGTGGCACTCGCTGGGGCCCAAGGTCGAGATCGCCGGCCTGCACGGCCTGCTCTTCGCGATCAGCCTGC
CGGTCTTTCTCTTCTGCCTGCTGAACCTGCTGCTGGCGCCGGTCGTGGCGCTGCCGTATCTGCGCAAGCCGCTGCTGGCG
CTGCTCGTCGTCATCGCCGCGGCCTGCCAGTACTTCATGTTCGAGTACCAGGTGCTGATCGACCGCAGCATGGTCCAGAA
CGTCTTCGAGACGAACCAGGCCGAGCTCGGTTCGTATCTGTCGGCGCCGCTGATGCTGACGATCCTCCTGCTCGGCGTGT
TGCCGGCCGGCGCGCTGCTGGCGCTGCGTGTGCAGCAGGACGGGCGGGCGCGCCAGGTGGCGATGCAGTGGCTGGCCAAC
GCCTTCGTGACGCTGGCCGTGCTGGCCGCCGTGACGCTGGTGTTCTACAAGGACTACGCCTCGCTGCTGCGCAACAACCG
ACAGATCAAGGACCAGGTGCTGCCGCTGAACTTCGTGCGCAGCACCCACGGTTACCTGAAGCGCCAGTTCAGCGCGAAAT
CCCAGCCGCTGCGCACGGTGGCCGAAGACGCGACGCGTGCTGCGCCGGCGGCCGGCGCACGGCCCAAACTGGTGATCCTC
GTCGTCGGCGAAACCGCGCGCGCGCAGAACTTCCAGCTCAACGGTTATCACCGGGCGACAAACCCCCTGCTGGCGCAACG
CGGAGACGTCATCAGCTTTCGCAACGTAGCGTCCTGCGGCACGGCGACGGCGGTTTCGCTGCCCTGCATGTTCTCGCGTC
TGCCGCGCGCGGACTACGACGAGGTGCGTGCGGCCACCGAGGAAAACCTGCTCGACGTGCTGCAGCGCACCGGCCTGGAC
ATCCTCTGGCGCAACAACAACAACGGCGGCTGCAAAGGCCAGTGCGAGCGTGTGCCCAGCGAGGACATGCCGGCGCTGAA
GGTCGCCGGCTCGTGCCTCAACCAGGACGGGACCTGCTATGACGAGGTTCTGCTGCACCGGCTCGACGAACGCATCACCG
CGATGCCGGGCGACGCGCTGATCGTGCTGCACCAGATCGGCAGCCACGGCCCGACCTACTTCGAGCGTTATCCGCCGCAG
GCCAGGGTCTTCAGCCCGACCTGCGACAGCAACCAGATCCAGAAGTGCAGCAACGAAGCGCTGGTCAACACCTACGACAA
CACCCTGGTCTACACCGACAGCATGCTCGGCAAGACCATCGAGCTGCTGCAGAGCTATTCAGCCGAGCGCGACGTGGCGC
TGGTCTACGTCTCCGACCACGGTGAATCGCTGGGCGAGCGCGGCATGTATCTGCACGGCACGCCCTACCTCATCGCACCC
AAGGAACAGACCCAGGTGCCGATGCTGATGTGGTTCTCGCCGGAGTTCGCGCGCAATGCCCGCCTGGGCCTGGCCTGCCT
GCGCGCCAACGCGAGCGAAAAAGCCTACAGCCACGACAACCTGTACCACTCGGTGCTCGGGCTGTTCGGCGTGAAAACCA
AGGTCTACCAGCGTGATCTGGACCTTTTTGCCGCCTGCCGCGAAACGGCGCCGGCGACCTAA

Protein sequence :
MLRRLLSLRLNPVQLGWVAALFFASFGNLVLWHSLGPKVEIAGLHGLLFAISLPVFLFCLLNLLLAPVVALPYLRKPLLA
LLVVIAAACQYFMFEYQVLIDRSMVQNVFETNQAELGSYLSAPLMLTILLLGVLPAGALLALRVQQDGRARQVAMQWLAN
AFVTLAVLAAVTLVFYKDYASLLRNNRQIKDQVLPLNFVRSTHGYLKRQFSAKSQPLRTVAEDATRAAPAAGARPKLVIL
VVGETARAQNFQLNGYHRATNPLLAQRGDVISFRNVASCGTATAVSLPCMFSRLPRADYDEVRAATEENLLDVLQRTGLD
ILWRNNNNGGCKGQCERVPSEDMPALKVAGSCLNQDGTCYDEVLLHRLDERITAMPGDALIVLHQIGSHGPTYFERYPPQ
ARVFSPTCDSNQIQKCSNEALVNTYDNTLVYTDSMLGKTIELLQSYSAERDVALVYVSDHGESLGERGMYLHGTPYLIAP
KEQTQVPMLMWFSPEFARNARLGLACLRANASEKAYSHDNLYHSVLGLFGVKTKVYQRDLDLFAACRETAPAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 8e-87 45
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 8e-87 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RGE_23080 YP_005437148.1 putative transferase BAC0485 Protein 5e-96 45