Gene Information

Name : RGE_20890 (RGE_20890)
Accession : YP_005436929.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2175568 - 2176410 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence :
ATGCCCGTCCAGGACCTTTCCGCCGCGCCGCCGCTGATCCGGCTCGACGGCCTCAGCAAACGCTTCCGCCTGCCCGGCGG
CGAGGTCTTCGACGCCGTGCACGAGGTCTCGCTGCAGGTGCGCCGCGGCGACGTCTTCGGCATCGTCGGCGCCAGCGGCG
CCGGCAAGTCGACGCTGCTGCGCCTGATCAACCTGCTGGAGACGCCCGACCGCGGCCGCGTCGAGGTCGACGGGCGCGTG
CTGACCGAACTCGGCAAGCGCGAGCTGCGCCTGGCGCGCCAGTCGATCGGCATGATCTTCCAGCAGTTCAACCTGCTGCA
GAACGCGACCGTCTTCGACAACATCGCCTTCCCGCTGCGCCTGCACGGCCGGCGCTCGCGTGCCGAAGTCGCCGAACGCG
TCGCCGAGTGCCTGGCCATCGTCGGCCTCACCGACAAGCGCGACAGCCATCCGGCGCAGCTGTCCGGCGGCCAGAAGCAG
CGGGTGGCGATCGCGCGTGCGCTGGCGCCGCATCCGTCGGTGCTGCTGTGCGACGAGCCGACCTCGGCGCTGGACGCCGA
CACCACGCGCCAGGTGCTGCGCACGCTGGCCGACATCAACGCCCGGCTGGGCGTGACGATCGTCATCGTCACCCACGAGC
TGGAGGTCGTGCGCTCGCTGTGCCGCCACGTCGCGGTCGTCGAACGCGGCGCGGTGGCCGAGCAGTTCGCGCTGTCGGAG
CACGGCGTGCGCCGCCGCACCTCGCTGGGCCGGGCGCTGCAGCGCCTCGTGGACCACCCGCCCGAACTCGACGCCGAAGG
CGACGAGGCCGTGGCCGAAGAACCGGAGCCCGCCCATGCCTGA

Protein sequence :
MPVQDLSAAPPLIRLDGLSKRFRLPGGEVFDAVHEVSLQVRRGDVFGIVGASGAGKSTLLRLINLLETPDRGRVEVDGRV
LTELGKRELRLARQSIGMIFQQFNLLQNATVFDNIAFPLRLHGRRSRAEVAERVAECLAIVGLTDKRDSHPAQLSGGQKQ
RVAIARALAPHPSVLLCDEPTSALDADTTRQVLRTLADINARLGVTIVIVTHELEVVRSLCRHVAVVERGAVAEQFALSE
HGVRRRTSLGRALQRLVDHPPELDAEGDEAVAEEPEPAHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 9e-48 46
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-47 46
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-24 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-23 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RGE_20890 YP_005436929.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-23 42