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Name : kdpB (RGE_20710) Accession : YP_005436911.1 Strain : Rubrivivax gelatinosus IL144 Genome accession: NC_017075 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit KdpB Function : - COG functional category : - COG ID : - EC number : 3.6.3.12 Position : 2158060 - 2160120 bp Length : 2061 bp Strand : - Note : protein synonym:ATP phosphohydrolase [potassium-transporting] B chain; protein synonym:potassium-binding and translocating subunit B; protein synonym:potassium-translocating ATPase B chain DNA sequence : ATGTCCCGCACTTCCCTGCCCCTGTTCGACGCGGCGCTGCTGCGTCCGGCGCTGGTCGACGCGCTGCGCAAGCTCGACCC GCGGGCGCAATGGCGCAACCCGGTGATGGCCGTGGTCTACGTCGGCAGCGCCTTCACGACCGCGCTGGCCGCGGCGAACC CCAGCCTGTTCTCGGTCGGCGTCGCCGCCTGGCTGTGGTTCACCGTGCTCTTCGCCAACCTCGCCGAGGCGCTGGCCGAA GGCCGCAGCAAGGCCCAGGCGGCGGCGCTGCGCGGCCTGAAGAAGAAGACCTGGGCCAAGAAGCTGGAACCCGGCAGCGC GCGCCACGAACGCAGCGCGATGCAGTGGCACCCGGTCGAGGCCGAGACGCTGCGCAAGGGCGACGTCGTGCTCGTCGAGG CCGGCGACACGATGCCCGCCGACGGCGAGGTCGTCGACGGCGTCGCCTCGGTCGACGAGAGCGCGATCACCGGCGAGTCG GCACCCGTCATCCGCGAGTCCGGCGGCGACTTCTCGGCCGTCACCGGCGGCACGCGCGTGCTGTCGGACTGGATCGTCGT GCGCGTCAGCGCCGACCCGGGCGAGGCCTTCGTCGACCGCATGATCGCGATGGTCGAGAACGCGCGCCGCGGCAAGACGC CCAACGAGATCGCGCTGACCATCCTGCTGGTCGCGCTGACCATCGTCTTCCTGGGCGTCGTCGCGACGCTGCTGCCGTTC TCGCGTTTCGCCGTCGACGCTGCCGGTGCCGGCGAGCCGGTCGACCTCGTGATGCTGGTGGCGCTGCTGGTGTGCCTGAT CCCGACGACGATCGCCGGGCTGCTGTCGGCGATCGGCGTGGCCGGCATGAGCCGGCTGCTGCGCGCCAACGTCATCGCCA CCTCGGGCCGCGCCGTCGAGGCCGCCGGCGACGTCGACGTGCTGCTGCTGGACAAGACCGGCACGATCACCTTGGGCAAC CGCCAGGCCGCGGCCTTCCTGCCGGCGGCCGGCGTCACCGAGGCCGAGCTGGCCGACGCGGCGCAGCTCGCGTCGCTGGC CGACACCACGCCCGAAGGCCGCAGCATCGTCGTGCTGGCCAAGCGCCACGGCCTGCGCGAACGCGAGCTGGCGGCGCTCG ACGCGGTCTTCGTGCCGTTCTCGGCGCAGACGCGCATGAGCGGCGTCGACCTGCCGGCCGGGCGCACGCTGCGCAAGGGC GCGGCCGACGCGCTGGCGCGCCACGTGCGCTCGCTGGGCGGCGAGTTCCCGGCCGGGCTGCAGCAGCTCGTCGACGAGGT CGCGCGCCGCGGCAGCACGCCGCTGGTGGTGGCCGACGGCGCGCGTGTGCTCGGCGTCGTCGAGCTCAAGGACGTCGTCA AGGGCGGCATCCGCGAGCGTTTCGCCGAGCTGCGCCGCATGGGCATCACGACGGTCATGGTCACCGGCGACAACCGCCTG ACGGCCGCGGCCATCGCCGCCGAGGCCGGCGTCGACGACGTGCTCGCCGAAGCCACGCCCGAGGCCAAGCTGAAGCTGAT CCGCGAGCACCAGGCCGCCGGCCGGCTGGTGGCGATGACCGGCGACGGCACGAACGACGCGCCGGCGCTGGCCCAGGCCG ACGTCGCCGTGGCGATGAACACCGGCACCCAGGCCGCCAAGGAGGCCGGCAACATGGTCGACCTCGACAGCAACCCGACC AAGCTGATCGAGATCGTCGAAACCGGCAAGCAGCTCCTGATGACGCGCGGCGCGCTGACCACCTTCAGCGTCGCCAACGA CGTCGCCAAGTACTTCGCCATCGTGCCGGCGGCCTTCGTCGGCACCTACCCGCAGCTGGCGGCGCTGAACGTCATGCAGC TCGCCAGCCCGGCCTCGGCGGTGCTGTCGGCGGTGATCTTCAACGCGCTGATCATCGTCGCGCTGATCCCGCTGGCGCTG CGCGGCGTGGCCTACCGCCCGGTCGGCGCGGCAACCCTGCTGCGACGCAACCTGGCCGTCTACGGCCTGGGCGGCGTCGT CGTGCCCTTCGTGGGCATCAAGCTGATCGACCTGGGCCTGGCGGCCACGGGTCTGTTCTGA Protein sequence : MSRTSLPLFDAALLRPALVDALRKLDPRAQWRNPVMAVVYVGSAFTTALAAANPSLFSVGVAAWLWFTVLFANLAEALAE GRSKAQAAALRGLKKKTWAKKLEPGSARHERSAMQWHPVEAETLRKGDVVLVEAGDTMPADGEVVDGVASVDESAITGES APVIRESGGDFSAVTGGTRVLSDWIVVRVSADPGEAFVDRMIAMVENARRGKTPNEIALTILLVALTIVFLGVVATLLPF SRFAVDAAGAGEPVDLVMLVALLVCLIPTTIAGLLSAIGVAGMSRLLRANVIATSGRAVEAAGDVDVLLLDKTGTITLGN RQAAAFLPAAGVTEAELADAAQLASLADTTPEGRSIVVLAKRHGLRERELAALDAVFVPFSAQTRMSGVDLPAGRTLRKG AADALARHVRSLGGEFPAGLQQLVDEVARRGSTPLVVADGARVLGVVELKDVVKGGIRERFAELRRMGITTVMVTGDNRL TAAAIAAEAGVDDVLAEATPEAKLKLIREHQAAGRLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSNPT KLIEIVETGKQLLMTRGALTTFSVANDVAKYFAIVPAAFVGTYPQLAALNVMQLASPASAVLSAVIFNALIIVALIPLAL RGVAYRPVGAATLLRRNLAVYGLGGVVVPFVGIKLIDLGLAATGLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-159 | 62 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 8e-160 | 62 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 1e-134 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-133 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-133 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-133 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-133 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-133 | 54 |
