Gene Information

Name : metB (RGE_20070)
Accession : YP_005436847.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase MetB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2086096 - 2087289 bp
Length : 1194 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCACACCACCGCCCCCGACGCCGACCGCCCGCTCGCCTTCGCCACGCGCACGATCCACGGCGGCCAGCACCCCGA
CCCGTCGACCGGCGCGATCATGCAGCCGATCTACGCCACCTCGACCTACGTGCAGAGCAGCCCCGGCGTGCACCAGGGCC
TGGACTACGGCCGCTCGCACAACCCGACGCGCTGGGCCTGGGAACGCGCCGTCGCCGACCTCGAAAGCGGCGCCCAGGCC
TTCGCCTTCGCCAGCGGGCTGGCGGCCATCGCCACCGTGCTGGAGCTGCTGCCGGCGGGCTCGCACGTCGTCAGCGGCGA
CGACCTCTACGGCGGCAGCTTCCGCCTCTTCGACAAGGTGCGGCGCCAGAGCGCGGGGCTGGAGTTCAGCTACGTCGACC
TCGCCGACCCCGAGGCGCTGCGCCGCGCGATCCGCCCGAACACGCGCCTGGTCTGGGCCGAGACGCCGACCAACCCGCTG
CTCAAACTCGCCGACCTGCGCGCCGTGGCCGCCATCGCCCACGAACACGGCCTGCTCGCCGCCGCCGACAACACCTTCGC
CAGCCCGTTCAACCAGCGGCCACTGGAGCTGGGCTTCGACCTCGTCGTGCACTCGGCGACCAAGTACCTCAACGGCCACA
GCGACGTCATCGGCGGCGTCGCCGTCGTCGGCCGCGACGAGCGCCTGGCGCCGGTGCGCGAGCGTCTGGGTTTCCTGCAG
AACGCCGTCGGCGCGATCGCCGGGCCTTTCGACAGCTTCCTGGCGCTGCGCGGCGTGAAGACGCTGGCGCTGCGTGTCGA
GCGCCACAACGCCAACGCGCTGGCGCTGGCGCGCTGGCTGGAGGCCCAGCCGCAGGTGGCGCGTGTGCACTACCCCGGGC
TGGAGTCGCACCCGCAGCACGCGCTGGCGCGGCGCCAGATGTCGGGCTTCGGCGGCATGATCTCGCTGGACCTGGCGACC
GACCTCGCCGGCGCGCGGCGTTTCCTCGAGGCGGTACGCATCTTCGCGCTCGCCGAGAGCCTGGGCGGCGTCGAGAGCCT
GATCGAGCACCCGGCGATCATGACCCACGCGACGATCCCGGCCGAGACGCGCGCCGCGCTCGGCATCGGCGACAGCCTGG
TGCGGCTGTCGGTCGGCATCGAGGACGTCGAAGACCTGCGCGCCGACCTGGCGCGCGCGCTGGCGGCGATCTAA

Protein sequence :
MSHTTAPDADRPLAFATRTIHGGQHPDPSTGAIMQPIYATSTYVQSSPGVHQGLDYGRSHNPTRWAWERAVADLESGAQA
FAFASGLAAIATVLELLPAGSHVVSGDDLYGGSFRLFDKVRRQSAGLEFSYVDLADPEALRRAIRPNTRLVWAETPTNPL
LKLADLRAVAAIAHEHGLLAAADNTFASPFNQRPLELGFDLVVHSATKYLNGHSDVIGGVAVVGRDERLAPVRERLGFLQ
NAVGAIAGPFDSFLALRGVKTLALRVERHNANALALARWLEAQPQVARVHYPGLESHPQHALARRQMSGFGGMISLDLAT
DLAGARRFLEAVRIFALAESLGGVESLIEHPAIMTHATIPAETRAALGIGDSLVRLSVGIEDVEDLRADLARALAAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-73 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-75 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-53 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_005436847.1 cystathionine gamma-lyase MetB BAC0207 Protein 2e-65 46