Gene Information

Name : mutS (RGE_15160)
Accession : YP_005436356.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1558320 - 1560926 bp
Length : 2607 bp
Strand : -
Note : -

DNA sequence :
ATGACCGACGCTTCCCCGCCGCTGCGCCGCCCCGACGCGCTCGACGACGCGGCCCTGGCCGCGCACACGCCGATGATGGC
GCAGTACCTGCGCATCAAAGCGGAGTTCCCCGACACGCTCGTCTTCTACCGGATGGGCGATTTCTACGAGCTCTTCTACG
ACGACGCGCGCAAGGCCAACCGGCTGCTGGACATCACGCTGACGACACGCGGCCAGAGCGCCGGCGAGCCGGTGGTGATG
GCCGGCGTGCCGGTGCATTCGGTCGACGCCTACCTCGCGCGCCTGCTGAAGCTGGGTGAGGCGGTAGCGATCGCCGAGCA
GGTCGGCGAGGTCGGCGCCGCCAAGGGCCCGGTCGAACGCAAGGTGGTGCGCGTCGTCACGCCGGGCACGGTGACCGACA
GCGAGCTGCTGGCCGAACGCAGCGACACGCTGCTGCTGGCCGTGCACCGCCAGCGCAACAGCTGGGGCCTGGCCTGGCTG
GGCCTGGCCAGCGGCGAGCTCGGGCTCACCGAATGCGCCGAACGTGAACTCGCCGGCTGGCTGGCGCGGCTGCAGCCGGC
CGAGCTGCTGCACGACGGCAGCGGCGAGCTGCCGGCGGCGCTGGCCCAGGCGCCCTGCGCACGCACGGCGCGCCCGGCCT
GGCAGTTCGAGTCGGCTTTGGGCGAACGCAAGCTGCGCGAGCAGCTGCAGGTCGCGACGCTGGCCGGCTTCGGCGCCCAG
GAACTGAAGGTCGCGCATGCCGCCGCCGCGGCGCTGCTGAGTTTTGCCGAACACACCCAGGGGCGCGCGCTGGCGCATCT
GCGCAGCGTCGCCGTGCCGCGCTCCAGCGAGCTGATCGAGCTGCCGCCGGCCACGCACCGCAACCTCGAGCTGGTGCAGA
CGCTGCGCGGCGAGGACAGCCCGACGCTGCTGTCGCTGCTGGACACCTGCCGCACCGGCATGGGCAGCCGCCGACTGCGC
CACTGGCTGACGCATCCGCAGCGCGACCGCAGCGAGGCGCGCGCGCGCCACGAAGCCATCGCCTGCCTGATGGACCGGAG
CTTCGAGCCGCTGCGCGACGCGCTGCGCGGCGTCAGCGACGTCGAGCGCATCACCGCGCGCATCGCGCTGCGCCAGGTGC
GCCCGCGCGAGCTGTCGGGCCTGCGCGCGACGCTGCTGGGCCTGCCGGCGCTGCGCGGCGCGGTGCCGGCCGGCGCGCCG
CTGCTCGCCGAGTTCGACGCCGCGCTGGCGCCCGACGACGGCATCGCCAACGTGCTGTCGGCCATCGCCGAGGAGCCGGC
GGTGATGCTGCGCGACGGCGGCGTCATCGCCGCCGGCGTCGACGCCGAGCTCGACGAGCTGCGCGCGATCAGCCAGAACT
GCGACGCCTTCCTGCTCGACCTGGAAGCGCGCGAACGCGCCCGCACCGGCATCGGCAACCTGCGCGTGCAGTTCAACAAG
GTGCACGGCTTCTACATCGAGGTCACGAGTTCCGGCCGCGACAAGGTGCCGGCCGACTACCAGCGCCGCCAGACGCTGAA
GAACGCCGAGCGCTACATCACGCCCGAGCTGAAGGCCTTCGAGGACAAGGCGCTGTCGGCGCAGGAACGTGCGCTGGCGC
GCGAGAAGTGGCTCTACGAGCAGGTGCTCGACGCGCTGCAGCCGCTGCTGCCGCCGCTGACCGCGCTGGCGCGCGCGCTG
GCCTCGCTGGACGCGCTGGCGACGCTGGCCGAACGTGCCGCGGCGCTGGGCTGGTGCCGGCCGGAGTTCGTGCCCTACCC
CTGCATCGAGATCGAGGCCGGCCGCCATCCGGTCGTCGAGGCGCGGCTGCGCGAGACCGGCGCCGGGCCTTTCATCGCCA
ACCACTGCCGGCTCGACGCGAAGACCAAGCTGCTGGTCATCACCGGCCCCAACATGGGCGGCAAGAGCACCTTCATGCGC
CAGGTGGCGCTGATCGTGCTGCTGGCGGCGATGGGCTCGTACGTGCCGGCCACGGCCTGCCGGCTGGGGCCGGTCGACGC
GATCCACACCCGCATCGGCGCCGCCGACGACCTGGCCAACGCGCAGTCGACCTTCATGCTCGAGATGACCGAGGCCGCGG
CCATCGTGCACACCGCCACCGAGCACAGCCTGGTGCTGATGGACGAGATCGGCCGCGGCACCAGCACCTTCGACGGCCTG
GCGCTGGCCGCGGCCATCGCCAGCCAGCTGCACGACCGCAACCGCAGCTTCACGCTGTTCGCGACGCACTACTTCGAGCT
CACCGAGTTCCCGGCCGAGCACGAGCGCGCGCTGAACCTGCACGTCGGTGCCGTCGAGAGCGGGCACGACATCGTCTTCC
TGCACCAGATCGAACCCGGCCCGGCCAGCCGCAGCTACGGCGTGCAGGTCGCGCGCCTGGCCGGCATGCCGGCGGCGGTG
ATCCGCCAGGCGCGTGCGACGCTGGAGGCGCTGGAAGCCAAGGCCCAGGCCGGCCATGCCCAGGTCGACCTGTTCGCGCC
GCCGCCGGCCGCCGCAGCGCCCGAGCCTTCGGCGGTGGAAGCGGCGCTGGCCGGGATCGACCCCGACCGCCTGGCGCCGC
GCGAGGCGCTGGACGCGCTCTACAAGCTCAAGGCCTTGCTCGGCTGA

Protein sequence :
MTDASPPLRRPDALDDAALAAHTPMMAQYLRIKAEFPDTLVFYRMGDFYELFYDDARKANRLLDITLTTRGQSAGEPVVM
AGVPVHSVDAYLARLLKLGEAVAIAEQVGEVGAAKGPVERKVVRVVTPGTVTDSELLAERSDTLLLAVHRQRNSWGLAWL
GLASGELGLTECAERELAGWLARLQPAELLHDGSGELPAALAQAPCARTARPAWQFESALGERKLREQLQVATLAGFGAQ
ELKVAHAAAAALLSFAEHTQGRALAHLRSVAVPRSSELIELPPATHRNLELVQTLRGEDSPTLLSLLDTCRTGMGSRRLR
HWLTHPQRDRSEARARHEAIACLMDRSFEPLRDALRGVSDVERITARIALRQVRPRELSGLRATLLGLPALRGAVPAGAP
LLAEFDAALAPDDGIANVLSAIAEEPAVMLRDGGVIAAGVDAELDELRAISQNCDAFLLDLEARERARTGIGNLRVQFNK
VHGFYIEVTSSGRDKVPADYQRRQTLKNAERYITPELKAFEDKALSAQERALAREKWLYEQVLDALQPLLPPLTALARAL
ASLDALATLAERAAALGWCRPEFVPYPCIEIEAGRHPVVEARLRETGAGPFIANHCRLDAKTKLLVITGPNMGGKSTFMR
QVALIVLLAAMGSYVPATACRLGPVDAIHTRIGAADDLANAQSTFMLEMTEAAAIVHTATEHSLVLMDEIGRGTSTFDGL
ALAAAIASQLHDRNRSFTLFATHYFELTEFPAEHERALNLHVGAVESGHDIVFLHQIEPGPASRSYGVQVARLAGMPAAV
IRQARATLEALEAKAQAGHAQVDLFAPPPAAAAPEPSAVEAALAGIDPDRLAPREALDALYKLKALLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 2e-147 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS YP_005436356.1 DNA mismatch repair protein MutS VFG0562 Protein 2e-164 49