Gene Information

Name : RGE_15070 (RGE_15070)
Accession : YP_005436347.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1551113 - 1551871 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGAACCTGATCGCCGCCGACGTCGGCGCGCGCCTGGGCGCACGCGAGGTGCTCTCGGGCGTGAGCTGCGTGCTCGAGAC
CGGCTGGACGACCATCGTCGGCCCCAACGGCGCCGGCAAGTCGACGCTGCTGCGTGTGCTGGCCGGGCTGCTGCCCTACC
AGCGCGGCACGGTCGAACTCGACGGCCGGCCGCTGGCCGACTGGGCGCCGCGCGAGCGCGCCGTGCGCGTGGCCTGGCTG
GCGCAGGCCGGCGAAGCGAGCGCCGATCTGACGGTGCGCGACACGGTGATGCTCGGCCGCCTGCCGCACCTGGGGCTGCT
GGGCACCGCCGGCGCGCGCGACGACGCCGCGGTCGACGCGGCGATGGACGCCACCGAGTGCCGCGACTGGCAGTACCGGC
GGCTGCAGCAGCTGTCCGGCGGCGAGCGCCAGCGCGTGCTGCTGGCGCGGGCGCTGGCCACCGAAGCGCCGGTGCTGCTG
CTCGACGAACCGACGACGCACCTTGACGCGCCGCACCAGGTGGCGCTGGCAAAGTTGTTCCGCCGGCTCGGAACTACGCA
CACGGTGGTCTCCGTGCTGCATGATCTGCCGTTGGCGCTGCACGCCGATCGGCTGCTGGTGCTGTGCGGCGGGCGCGTGC
TCGCCCACGGCAGCCACGATGATCCGGTCGTGCACGCCGCACTCGTCGACGCCTTCGGCGGCGCGGTGCGCATCGACCGC
AGCGGCGCCCGGGCCATGGCGCTGCCAGATCTGGGATAA

Protein sequence : 
MNLIAADVGARLGAREVLSGVSCVLETGWTTIVGPNGAGKSTLLRVLAGLLPYQRGTVELDGRPLADWAPRERAVRVAWL
AQAGEASADLTVRDTVMLGRLPHLGLLGTAGARDDAAVDAAMDATECRDWQYRRLQQLSGGERQRVLLARALATEAPVLL
LDEPTTHLDAPHQVALAKLFRRLGTTHTVVSVLHDLPLALHADRLLVLCGGRVLAHGSHDDPVVHAALVDAFGGAVRIDR
SGARAMALPDLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 5e-21 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-23 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-22 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-22 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-22 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-22 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RGE_15070 YP_005436347.1 ABC transporter ATP-binding protein BAC0164 Protein 8e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RGE_15070 YP_005436347.1 ABC transporter ATP-binding protein VFG1042 Protein 7e-26 41
RGE_15070 YP_005436347.1 ABC transporter ATP-binding protein VFG0925 Protein 2e-20 41