Gene Information

Name : glnA (RGE_14370)
Accession : YP_005436277.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 1475249 - 1476664 bp
Length : 1416 bp
Strand : +
Note : protein synonym:glutamate--ammonia ligase

DNA sequence :
ATGGCAAAGACCGTTGCCGACGTGATGAAGCTGGTGAAGGAGAACGAAGTCAAGTTCGTCGACTTCCGCTTCACCGACAC
CCGCGGCAAGGAACAGCACGTCTCGGTGCCCGTTTCCGCTTTCGACGAAGACAAGTTCACCGCCGGTCATGCCTTCGACG
GCTCCTCGATCGCCGGCTGGAAGGGCATCGAAGCGTCCGACATGCTGCTGATGCCGGACCCGAACAGCGCCAACATCGAC
CCGTTCTACGAAGAGCCGACGCTGATCCTGACCTGCGACGTGCTCGAGCCGGGTGACGGCAAGCCCTACGACCGCGATCC
GCGTTCGCTGGCCAAGCGCGCCGAGGCCTACCTGAAGAGCAGTGGCCTGGGCGACACCGCCTTCTTCGGCCCGGAACCCG
AGTTCTTCATCTTCGACCAGGTCCACTGGCACGTCGGCATGGACGGCAGCCACGTGAAGATCACGTCGGAAGAAGCGCCG
TGGTCGACGAGCAAGGAGCTCGAAGGCGGCAACATGGGCCACCGTCCGGCGGTCAAGGGTGGCTACTTCCCGGTGCCCCC
GGTCGACAGCTTCCAGGACATGCGCTCGGAGATGTGCCTGATCCTCGAATCGCTGGGCATCCCGGTCGAAGTCCACCACC
ACGAAGTGGCGGCCCCGGGCCAGAACGAGATCGGCACCAAGTTCAGCACGCTCGTCGAGCGCGCCGACTGGCTGCAGCTG
CAGAAGTACGTGATCCACAACGTCGCGCACGCCTACGGCAAGACCGCGACCTTCATGCCCAAGCCCGTCGTCGGCGACAA
CGGCTCCGGCATGCACGTGCACCAGTCGGTCTGGAAGGACGGCAAGAACCTGTTCGCCGGCGACGGCTACGGCGGCCTGT
CCGAGTTCGCGCTGTACTACATCGGCGGCATCATCAAGCACGCCCGTGCGCTGAACGCGATCACGAACCCGGGCACCAAC
AGCTACAAGCGTCTGGTGCCGGGCTTCGAAGCGCCGGTCAAGCTGGCCTACTCGGCCCGCAACCGCTCGGCCTCGATCCG
CATCCCGTTCGTCAGCAACCCGAAGGGCCGCCGCATCGAGGCGCGCTTCCCGGATCCGCTGATGAACCCGTACCTGGGCT
TCGCCGCGCTGCTGATGGCCGGCCTGGACGGCGTCGAGAACAAGATCCACCCGGGCGAAGCCGCCACCAAGGATCTGTAC
CACCTGCCGCCGGAAGAAGACGCGAAGATCCCGACCGTCTGCCACAGCCTCGACCAGGCCCTCGAGTACCTCGACAAGGA
CCGCGCCTTCCTGACCAAGGGCGGCGTGTTCACCGATGCGTACCTCGACGCCTACATCGACCTGAAGATGCAGGAAGTCA
CGCGCTTCCGCATGACGACCCATCCGGTCGAGTTCGACATGTACTACAGCATCTAA

Protein sequence :
MAKTVADVMKLVKENEVKFVDFRFTDTRGKEQHVSVPVSAFDEDKFTAGHAFDGSSIAGWKGIEASDMLLMPDPNSANID
PFYEEPTLILTCDVLEPGDGKPYDRDPRSLAKRAEAYLKSSGLGDTAFFGPEPEFFIFDQVHWHVGMDGSHVKITSEEAP
WSTSKELEGGNMGHRPAVKGGYFPVPPVDSFQDMRSEMCLILESLGIPVEVHHHEVAAPGQNEIGTKFSTLVERADWLQL
QKYVIHNVAHAYGKTATFMPKPVVGDNGSGMHVHQSVWKDGKNLFAGDGYGGLSEFALYYIGGIIKHARALNAITNPGTN
SYKRLVPGFEAPVKLAYSARNRSASIRIPFVSNPKGRRIEARFPDPLMNPYLGFAALLMAGLDGVENKIHPGEAATKDLY
HLPPEEDAKIPTVCHSLDQALEYLDKDRAFLTKGGVFTDAYLDAYIDLKMQEVTRFRMTTHPVEFDMYYSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-102 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_005436277.1 glutamine synthetase VFG1399 Protein 1e-103 50