Gene Information

Name : intI (RGE_11840)
Accession : YP_005436024.1
Strain : Rubrivivax gelatinosus IL144
Genome accession: NC_017075
Putative virulence/resistance : Unknown
Product : DNA integrase IntI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1237498 - 1238508 bp
Length : 1011 bp
Strand : -
Note : -

DNA sequence : 
ATGCCCACGACCCCGGCCGCAGCCGCCGCCGGATCCCCCGCCCCTCGCCGCCTGCTCGACCAGCTCCGCGACGCCCTGCG
CAACTGCCACTACAGCCTGCGCACCGAGCAGGCCTACGTGCACTGGACCAAGGCCTTCATCCGCTTCCACGGGCTGCGCC
ACCCGGCGACGATGGCCGGGCCCGAGGTCGCGGCCTTTCTCTGCCACCTGGCCGCCGAACGCGGGCTGTCGGTGTCCACG
CACCGCCAGGCGCTGTCGGCGCTGCTCTTTCTCTACGGCAAGGTGCTCGGCCAGTCGCTGCCGTGGATGGACGAGATCGG
CCGCCCGGTGCCCAAGCGCCGGCTGCCGGTGGTGCTGTCGCCCGCCGAGGTGGCCGCCGTGCTGGACCGGCTGGACGGCA
CCCACCGGCTGCTGGGAGAGCTGCTGTACGGCACTGGCCTGCGCATCACCGAAGCGCTGCAGCTTCGCGTCAAGGACATC
GATTTCGCCCAGCGCGCGATCGTCGTGCGCGCCGGCAAGGGCGGTAAGGACCGCGTCGTGACGCTGCCGGCGACGCTGGA
GGCACCGTTGCGCGAACAGTTGCGCGCCGTACATGCGGTCTGGGCCGAGGACTCGGCGGCCGGCCACGCCGGCGTTCAAC
TGCCCGACCCACTGGAGCGCAAGGTCCCGCGCGCCGGTTCGAGCTGGGCCTGGTTCTGGGTCTTTCCGCAGGGCGGCCAT
TCGGTGGACCCGCGCAGCGGCGTCGTGCGCCGCCATCACCTGGTGCCGGGCACCTTCCAGCGTGCGTTCGCCAGGGCGCT
GCAGGCCGCCGGCATTGCCAAGACGGCCACGCCGCACACGCTGCGCCACAGCTTCGCGACGCACCTGCTGCAGTCGGGCA
GCGACATCCGCACGGTGCAGGAGCTGCTGGGCCACTCGGATGTCGCGACGACGATGATCTACACCCACGTGCTGCGCCTG
GGCGGCTACGCGGTGCAGAGCCCGCTGGACCGGCTGGCGCCGGCCCGCTGA

Protein sequence : 
MPTTPAAAAAGSPAPRRLLDQLRDALRNCHYSLRTEQAYVHWTKAFIRFHGLRHPATMAGPEVAAFLCHLAAERGLSVST
HRQALSALLFLYGKVLGQSLPWMDEIGRPVPKRRLPVVLSPAEVAAVLDRLDGTHRLLGELLYGTGLRITEALQLRVKDI
DFAQRAIVVRAGKGGKDRVVTLPATLEAPLREQLRAVHAVWAEDSAAGHAGVQLPDPLERKVPRAGSSWAWFWVFPQGGH
SVDPRSGVVRRHHLVPGTFQRAFARALQAAGIAKTATPHTLRHSFATHLLQSGSDIRTVQELLGHSDVATTMIYTHVLRL
GGYAVQSPLDRLAPAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intI1 AFV53119.1 IntI1 integrase Not tested AbGRI2-1 Protein 4e-98 69
unnamed AAL08437.1 Tn21 integrase IntI1 Not tested SRL Protein 5e-98 69
intI1 AAK02045.1 integrase Not tested SGI1 Protein 5e-98 69
intI1 AGK36642.1 IntI1 integrase Not tested AbaR26 Protein 4e-98 69
intI1 ABB48427.1 IntI1 integrase Not tested SGI1 Protein 4e-98 69
intI1 ABZ01842.1 IntI1 Not tested SGI2 Protein 5e-98 69
unnamed ACF06155.1 class 1 integrase Not tested Tn5036-like Protein 1e-98 69
intI CAJ77082.1 Integrase Not tested AbaR1 Protein 4e-98 69
intI CAJ77028.1 Integrase Not tested AbaR1 Protein 5e-98 69
intI YP_001844881.1 integrase Not tested AbaR20 Protein 5e-98 69
intI1 AGK07098.1 IntI1 integrase Not tested SGI1 Protein 1e-98 69
intI1 AGF35060.1 IntI1 integrase Not tested SGI1 Protein 4e-98 69
intI1 ACY75520.1 integrase Not tested Tn6060 Protein 5e-98 69
intI1 YP_005797130.1 integrase Not tested AbaR4e Protein 5e-98 69
intI1 AGK06930.1 IntI1 integrase Not tested SGI1 Protein 4e-98 69
intI1 ACY75535.1 integrase Not tested Tn6060 Protein 5e-98 69
intI1 YP_005797145.1 integrase Not tested AbaR4e Protein 5e-98 69
intI1 AGK06967.1 IntI1 integrase Not tested SGI1 Protein 4e-98 69
intI1 AGF34986.1 IntI1 integrase Not tested SGI1 Protein 5e-98 69
intI1 ACN81019.1 IntI1 integrase Not tested AbaR5 Protein 5e-98 69
intI1 AGK07013.1 IntI1 integrase Not tested SGI1 Protein 4e-98 69
intI1 AGF35026.1 IntI1 integrase Not tested SGI1 Protein 5e-98 69
EC042_4092 YP_006098375.1 integrase Not tested Tn2411 Protein 2e-98 69
intI1 AGK07071.1 IntI1 integrase Not tested SGI1 Protein 4e-98 69
intI1 CAB46685.1 DNA integrase Not tested Not named Protein 5e-98 69
intI1 AFL65913.1 class 1 integrase Not tested SGI1-J6 Protein 3e-78 68
int1 YP_005160012.1 integrase Not tested Not named Protein 8e-84 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
intI YP_005436024.1 DNA integrase IntI VFG1028 Protein 3e-98 69