Gene Information

Name : xylB (SELR_00640)
Accession : YP_005431795.1
Strain : Selenomonas ruminantium TAM6421
Genome accession: NC_017068
Putative virulence/resistance : Unknown
Product : putative xylulose kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.17
Position : 67534 - 69027 bp
Length : 1494 bp
Strand : -
Note : -

DNA sequence :
ATGAACTATTTGCTCGGTGTGGATATCGGTACCTCCGCCACCAAGACGGTATTGTTTGATGAAGAATGCCATGTGGTGAC
CGAGGCATCCGCAGAATATCCTCTGTATCAGCCCCAGAACGGCTGGGCAGAACAAAATCCCAAAGACTGGTCGGCCGCTG
CCGTCAGCACGATCCGCGAAGTACTGGCCAAGGCTCAGATCGATCCGGCTGCTGTCAAGGGCGTCGGCTTATCCGGCCAG
ATGCATGGCCTGGTGATGCTCGATGAGGCGAACGAGGTCATCCGCCCGTCCATTATCTGGTGCGACCAGCGCACGGCGGC
GGAATGTGCAGAGATAACGGCCAAGATTGGCAGAGAGCGGCTCATTGAGATCACCGCCAATCCAGCCCTGACCGGCTTCA
CCGCATCCAAGATCCTCTGGGTGCGCAATCATGAACCGGAAAATTACCGGCGCTGCCGCCATATCCTGCTGCCTAAGGAT
TATGTGCGCTTCTGCATGACCGGCGACTATGCTACGGAAGTTTCCGATGCCAGCGGCATGCAGCTGCTCGATGTGCCAAA
GCGTCAGTGGTCGGATGAGATTTTGGAAAAGCTTGCTATCGACAAGGCTTTGCTGCCAAAAGTATACGAATCCCCTGAGG
CTACCGGCCATATCAGCGCCGAGTTCGCCCAACTGACCGGCCTGACGACGGACTGCGTGGTAGCTGGCGGTGCTGGAGAC
AATGCAGCCGCAGCCGTGGGCACTGGCGTCGTGGAAGACGGCAAGGCCTTCACGACAATCGGCACCAGCGGCGTGGTCTT
CGCCCATACCAGCGAGCCCCGCATCGACCCGCAGGGCCGCGTACATACCTTCTGCTGTGCCGTGCCAGGCTGCTGGCATG
TGATGGGGGTAACCCAGGCCGCCGGCCTTTCCCTCAAATGGTTCCGGGAGAACCTGGCGGAGAATATGGATTACAACGCC
ATCAACGAAGCCATCAACAGCGTGCCCAGAGGCAGCCGCCGGCTTCTCTACCTGCCCTATCTGATGGGCGAGCGCACCCC
CCATCTCGATCCGGACTGCCGGGGTACATTCTTCGGTCTGTCCGCCATGCATAAACGGGCCGACATGCTGCGGGCCGTGA
TGGAAGGCGTCAGCTATTCCCTGCGGGATTGCTGGGATATTCTCAAAGAGATGGACGTGGAAGTCACGGATATGATGGCC
TGCGGCGGCGGCAGCAAGAGCCCCATCTGGCGGCAGATGCTGGCCGATATGTATGACTGCCCGGTAAAAACCGGCAGCGA
GGCTGGCGGCCCGGCTTTGGGCGTAGCGATCCTGGCTGGCGTAGCAGCAGGCATCTTCACCGATGTGCCCAGCGCCTGCC
GCAAATACATCAGTACCACAGCCGTATGCCAGCCGGAAACGGATGCGCATCAATATTACGAACGCGGCCATCAGCTTTAC
CAAAAACTCTATCAGCAGCTTAAAAGCTGCTATCAGGAATTGTCCTTGTTATAA

Protein sequence :
MNYLLGVDIGTSATKTVLFDEECHVVTEASAEYPLYQPQNGWAEQNPKDWSAAAVSTIREVLAKAQIDPAAVKGVGLSGQ
MHGLVMLDEANEVIRPSIIWCDQRTAAECAEITAKIGRERLIEITANPALTGFTASKILWVRNHEPENYRRCRHILLPKD
YVRFCMTGDYATEVSDASGMQLLDVPKRQWSDEILEKLAIDKALLPKVYESPEATGHISAEFAQLTGLTTDCVVAGGAGD
NAAAAVGTGVVEDGKAFTTIGTSGVVFAHTSEPRIDPQGRVHTFCCAVPGCWHVMGVTQAAGLSLKWFRENLAENMDYNA
INEAINSVPRGSRRLLYLPYLMGERTPHLDPDCRGTFFGLSAMHKRADMLRAVMEGVSYSLRDCWDILKEMDVEVTDMMA
CGGGSKSPIWRQMLADMYDCPVKTGSEAGGPALGVAILAGVAAGIFTDVPSACRKYISTTAVCQPETDAHQYYERGHQLY
QKLYQQLKSCYQELSLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0083 AAM75287.1 EF0083 Not tested Not named Protein 5e-76 42
xylB NP_814327.1 D-xylulose kinase Not tested Not named Protein 7e-76 42