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Name : smpB (SELR_03460) Accession : YP_005432077.1 Strain : Selenomonas ruminantium TAM6421 Genome accession: NC_017068 Putative virulence/resistance : Unknown Product : putative SsrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 390073 - 390546 bp Length : 474 bp Strand : + Note : protein synonym:putative tmRNA binding protein DNA sequence : GTGGGCAAGAAAAATATCGGCATGAAGGTAGTCTGCGAAAACCGCAAGGCCCGCCATGACTACTTCATACACGAAACCTT TGAGACAGGGCTTGCCCTCGTGGGCACGGAGGTCAAATCCCTGCGCGCCGGCAAGGCCAACCTCAAGGACAGCTATGCCA TGATCAAAGACGGGGAGATCTTCGTGGAGAACATGCACGTTTCTCCCTACGATCAGGGCAATATCTTCAATCACGATCCC CTGCGGGCCCGCAAGCTCCTGATGCATAAGAGCGAGATCGTCAAGCTTTTCGCCAAGACCAGAGAAAAGGGCTTTACCCT GGTGCCACTCAAAATCTACTTCAAGAATGGCAAGGCTAAGCTGGAACTGGCGCTGGCTTCGGGTAAACACAACTACGACA AGCGGCAGGATCTCCATGAGAAAGCCGCCAAGCGGGAAGTGGAACGGGCTCTCAAAGACAGACAACATTATTGA Protein sequence : MGKKNIGMKVVCENRKARHDYFIHETFETGLALVGTEVKSLRAGKANLKDSYAMIKDGEIFVENMHVSPYDQGNIFNHDP LRARKLLMHKSEIVKLFAKTREKGFTLVPLKIYFKNGKAKLELALASGKHNYDKRQDLHEKAAKREVERALKDRQHY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-41 | 62 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 1e-35 | 53 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 3e-28 | 42 |
