Gene Information

Name : metB (SELR_27840)
Accession : YP_005434515.1
Strain : Selenomonas ruminantium TAM6421
Genome accession: NC_017068
Putative virulence/resistance : Resistance
Product : putative cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.48
Position : 2950152 - 2951312 bp
Length : 1161 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAAACATAAATTTGATACCGCCCTGATACACGGCGGCATTTACGGGGACAGCAGGACAGGTTCGGTAAATGTGCC
CATCTATCAAACTTCCACCTTTGAACAGGACGGGCTGGGAGAATTGCGGGAGGGCAAATGGGAGTATTCCCGCACGGGAA
ATCCCACCCGGGCGGCGCTGGAAGCCCTGATTTCCGAGCTGGAAGGAGGCGAGGCAGGTTTTGCCTTCGCTTCAGGCATG
GCGGCCATCACAGCAGTGCTCAGCCTGTTCCAAAGCGGTGTGAAGATCCTGCTGTCCAGCAATGTCTATGGTGGTACCTT
TCGGGTGCTGGACAAGGTGTTCAGCCGCTTCAACCTCACCTATGCTTTGCAGGATACCACGGATTTGGCAGCTTTGGAGC
GGGAGTTCACTCCGGAGGTCAAGGCTATCATCATTGAAAGCCCCGCCAATCCGTTGCTGACTATTACGGATATCCGCAAG
GTATCGGAAATCGCCCACCGTCATGGCGTGCTGGTGATTGTGGACAACACCTTTATGACGCCCTATCTCCAGCAGCCTTT
GGCGCTGGGGGCCGATGTGGTGGTACACAGTGCCACCAAGTATCTGGGCGGCCACAGTGATCTGGTGGCTGGTCTGGCGG
TGGTCAAGACCAAGGAGCTGGCGGAAAAGCTGGCCTTTGTGCAGAATTCCACCGGCGGGGTATTGGGCCCCCAGGACGCC
TTCCTGCTGATCCGGGGCATCAAGACACTGGGCGTGCGGTTGGACCGCCATGTGGCCAATGCCACTTATCTGGCCGAATG
GCTGGCAGGCAATCTGGAGGTGGCAAAAGTCTACTATCCCGGCCTGACCAGTCATATCGGCTACGAAATCAATCAGCAGC
AGGCGAAGAACGGTGGTGCCATGATTTCCTTTGAACTGACAGAAGGCCATGATATCCGTAAATTCTTCAAGTCTTTGGGG
CTTATCGCCTTGGCGGAAAGCTTGGGCGGCGTGGAGAGCCTTGTCTGCCATCCGGCCAGCATGACCCATGCGGCTATCCC
CAAGGAAACCCGGGACAAGATCGGCATCACGGAAAATCTTATCCGCCTGTCCGTGGGCATTGAGGATAAGGATGATCTGC
TGACAGATCTGAAACAGGCCATTGAGGCCAGCCGGATTTAA

Protein sequence :
MSKHKFDTALIHGGIYGDSRTGSVNVPIYQTSTFEQDGLGELREGKWEYSRTGNPTRAALEALISELEGGEAGFAFASGM
AAITAVLSLFQSGVKILLSSNVYGGTFRVLDKVFSRFNLTYALQDTTDLAALEREFTPEVKAIIIESPANPLLTITDIRK
VSEIAHRHGVLVIVDNTFMTPYLQQPLALGADVVVHSATKYLGGHSDLVAGLAVVKTKELAEKLAFVQNSTGGVLGPQDA
FLLIRGIKTLGVRLDRHVANATYLAEWLAGNLEVAKVYYPGLTSHIGYEINQQQAKNGGAMISFELTEGHDIRKFFKSLG
LIALAESLGGVESLVCHPASMTHAAIPKETRDKIGITENLIRLSVGIEDKDDLLTDLKQAIEASRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-87 52
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-89 52
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-63 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_005434515.1 putative cystathionine gamma-synthase BAC0207 Protein 4e-66 48