Gene Information

Name : SELR_26920 (SELR_26920)
Accession : YP_005434423.1
Strain : Selenomonas ruminantium TAM6421
Genome accession: NC_017068
Putative virulence/resistance : Virulence
Product : putative sugar transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2843445 - 2844080 bp
Length : 636 bp
Strand : -
Note : -

DNA sequence : 
GTGTACGCAAAATATTTAAAACGAATAATGGATTTTATACTCTCATTGAGCGCAATAGTTATTCTTTCACCATTGCTTTT
ATTATTAACATTAATTGGCGCAATCAAGATGAAAGGGAATCCATTTTTTACCCAGGAAAGACCCGGCTGCCATGAGAAAG
TGTTCAAACTCATAAAGTTCAGGACAATGACGAATGATAAGGACAAAGATGGAACCTTGTTACCTGATGAATTTAGGCTG
AATGCCTACGGAAAATTTTTACGTTCAACCTCACTGGATGAACTTCCTGAGTTGTTTAATATCCTTGCAGGCCATATGTC
AATAGTAGGCCCTAGGCCTCTTCTGGTCAGATACCTTCCTTGGTATACAGAAGAACAATCTCATCGTCATGATGTCAGGC
CTGGACTGACTGGTTATGCACAGGCACACGGGCGTAATGCAGTCAATTGGGATGATAAATTTGCGATGGATTTGAAATAT
GTTGAACGTATTACGTTTATCGGTGATCTAAGGATTATTGTTGACACCGTAAAGGCTGTGGTTAAACGTGAGGGAATTAA
TTCGGATACCTCTGTAACTATGGAAAGCTTTGTTGATTACTGTGTTGAACTTGGGCGGAAACCAAGAAATAGTTAA

Protein sequence : 
MYAKYLKRIMDFILSLSAIVILSPLLLLLTLIGAIKMKGNPFFTQERPGCHEKVFKLIKFRTMTNDKDKDGTLLPDEFRL
NAYGKFLRSTSLDELPELFNILAGHMSIVGPRPLLVRYLPWYTEEQSHRHDVRPGLTGYAQAHGRNAVNWDDKFAMDLKY
VERITFIGDLRIIVDTVKAVVKREGINSDTSVTMESFVDYCVELGRKPRNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-21 45
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 4e-20 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SELR_26920 YP_005434423.1 putative sugar transferase VFG1369 Protein 2e-19 43
SELR_26920 YP_005434423.1 putative sugar transferase VFG1309 Protein 3e-18 41