Gene Information

Name : SELR_25120 (SELR_25120)
Accession : YP_005434243.1
Strain : Selenomonas ruminantium TAM6421
Genome accession: NC_017068
Putative virulence/resistance : Unknown
Product : putative L-fucose permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2653823 - 2655157 bp
Length : 1335 bp
Strand : -
Note : protein synonym:L-fucose:H+ symporter permease

DNA sequence :
ATGCTGTTTGGTAAGCGTAACGATATTGAACAATACGACAATGGTTATATCAGTAAGATTCCGGTGTTCCAGTTTATTTT
GCTGTCCTGTCTGGTGCCCCTGTGGGCGGCAGCAGCCAGCCTCAATGACGTGCTGATCACGCAATTCAAGAGCGTGTTCG
CGCTGAGTGACTTTGCGTCTGCACTGGTGCAGAGCGCCTTCTACAGCGGTTATTTCTTGATTTCCATTCCGGCCTCCATG
GTCATCCGCAATACGACCTATAAGACGGCCATCCTCTGCGGCCTCGGCTTCTATATCGCCGGTTGCAGCCTGTTCTTCCC
GGCTTCCCATATGGCAACGTATACCATGTTCCTTGTGGCTATCTTTGCCATTGCCATCGGTCTGGGCTTTCTGGAGACCT
CGGTCAACACCTACAGCACCATGCTTGGCCCCCAGGAAACGGCTACCCTGCGCCTGAACATCAGCCAGACCTTCCAGCCG
CTGGGCTCCATTGCCGGTATCCTTCTGGGCAAGTATCTGATCTTCCAGGAAGGCGAGTCCATGGCCAGCCAGCTGGCCAG
CATGGATGCCGTGCAGGCCGCCGCCTACAAGATGGAAATGCTTCAGCATACCTTGGAACCTTACCATATCATGATCTATA
TCCTGCTGGGTATCTTTGCGCTGTTTGCGGTGACGGCTTATCCGAAATGCAAGGTCAAGAGTGCTTCTACGGAAGGCGTG
CCCAGCATTGGCAAGACGCTTTCCTATCTGGCTGGCAATGGCCGCTTCAAGCGCGGCATCGTGGCTCAGTTCCTCTATGT
GGGCATGCAGGTGGCTGTCTGGTCCTTTACCATCCGTCTGGCCCTGCATCTCGACCCGACCATCAATGAACGTGCCGCTG
CCAATTACATGGTGGTAAGCTTCATCTTCTTCTTTGTGGGCAAATTCATTGCCAACTTCCTGATGACCAAGTTCTCCGCC
AACAAGGTTCTGGCTCTCTATGCTGCCATTGGCGTGCTGGATATCTTCGTGGTGGCTTTCGCTCCGGGCATGGCCGCTAT
CTACGGTGCCATCTTCGCCAGCTTCCTCTTTGGCCCCTGCTGGGCAACGATTTACGCCCGCACGCTGGATGCCGTGGAAA
AGAAGTACACGGAAACGGCTGGTGCCATCATCGTCATGTCCATTATCGGCGGTGCTTTCGTGCCAGCGATTCAGGGCTAT
GTGTCCGATATCACTGGTTCCATGCAGCTTTCCTTTATCATCAATGTGGTATGCTTTGCCTTCATTGCCTGGTACTTCCA
TAAGGAAGCTCAGCTGGAAGCAGGCGAGGAGCTGGAACTGGCCCATCAGAATTAA

Protein sequence :
MLFGKRNDIEQYDNGYISKIPVFQFILLSCLVPLWAAAASLNDVLITQFKSVFALSDFASALVQSAFYSGYFLISIPASM
VIRNTTYKTAILCGLGFYIAGCSLFFPASHMATYTMFLVAIFAIAIGLGFLETSVNTYSTMLGPQETATLRLNISQTFQP
LGSIAGILLGKYLIFQEGESMASQLASMDAVQAAAYKMEMLQHTLEPYHIMIYILLGIFALFAVTAYPKCKVKSASTEGV
PSIGKTLSYLAGNGRFKRGIVAQFLYVGMQVAVWSFTIRLALHLDPTINERAAANYMVVSFIFFFVGKFIANFLMTKFSA
NKVLALYAAIGVLDIFVVAFAPGMAAIYGAIFASFLFGPCWATIYARTLDAVEKKYTETAGAIIVMSIIGGAFVPAIQGY
VSDITGSMQLSFIINVVCFAFIAWYFHKEAQLEAGEELELAHQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoP ADD91723.1 permease DeoP Not tested PAI-I AL862 Protein 5e-127 64
unnamed CAE85172.1 hypothetical protein Not tested PAI V 536 Protein 2e-127 64