Gene Information

Name : tkt (SELR_20140)
Accession : YP_005433745.1
Strain : Selenomonas ruminantium TAM6421
Genome accession: NC_017068
Putative virulence/resistance : Unknown
Product : putative transketolase
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.1
Position : 2080004 - 2082007 bp
Length : 2004 bp
Strand : -
Note : -

DNA sequence :
TTGAGTAACATCGATACTACTTGTGTAAATGCTATCCGCGTTCTGGCAGCTGATGCTGTGCAGAAGGCAAATTCCGGCCA
TCCGGGCCTGCCCCTGGGCAGTGCACCTATGGCTTATGAGCTGTGGGCTAACCATATGAACCACAATCCGAAGAACCCCC
AGTGGGCTAACCGTGACCGTTTCATCCTGTCCGGTGGACATGGTTCTACGCTGCTCTATTCCTTGCTCCATTACTTTGGC
TATGGCCTGACCATGGACGATATGAAGAACTTCCGTCAGGATGGTTCCTTGACGCCTGGTCATCCGGAATACGGCCATAC
GGTTGGTGTTGAAGCCACCACGGGCCCGCTGGGCGCCGGCATGGGCATGGCTGTGGGCATGGCTATGGCTGAAGCACATC
TGGCTGCTGAATTCAATCAGCCGGGCTATGATGTGGTTGACCATTACACCTTCGCTCTGGGCGGCGACGGCTGCATGATG
GAAGGCATTTCCTCCGAGGCTTTCTCTCTGGCTGGCACCCTCGGTCTCTCCAAACTCATTATCCTTTACGATTCCAACAA
TATCTCCATCGAAGGCAGCACGGATATCGCCTTCACGGAAAATGTGGAAAAACGCATGCAGGCTTTCGGCTTCCAGACGC
TGACGGTGGAAGACGGCAATGACCTTGAGGCCATCGGCAAGGCTATCGAAGCTGCCAAGGCTGATAAGGAACATCCGTCC
TTCATCACGGTGAAGACGCAGATTGGCTATGGCTGCCCGGCTAAGCAGGGCAAGGCCAGCGCTCATGGCGAACCCCTGGG
TGTAGAAAATGTCAAGGCCCTCAAGGAAACTCTTGGCTGGCCGGAACCGGACAAGAGCTTCAACATTCCGCAGAATGTCT
ATGACCACTATCAGGAACTGGCTGCTAAGGGGGCTCAGGCAGAAGAAGCCTGGAATAAGCTCTTTGCTGACTACTGCGCG
AAGTTCCCGGAACTCAAGGCTAAATGGGATAAGTTCCATGCACCGGTTGATGCTCAGGCTCTGCTGGACAATGAAGAATT
CTGGTTCTATGAAGACAAGGCACAGGCTACCCGTGCTGTTTCCGGCACCATGATCAACCGCCTCAAGGATCTCCTGCCGA
ACCTCTTCGGCGGCAGTGCTGACCTGGCTCCGTCCAACAAGACGGACATGAAGGATGCCGGCGATTTCTCCAAGGACAAC
TATGCTGGCCGCAACCTGCACTTCGGCGTGCGCGAACTGGCTATGGCAGCTATTGCCAACGGCATCACCCTGCATGGTGG
CCTGCGCAATTATGTGGCTACTTTCTTCGTGTTCAGCGACTACATCAAGCCCATGGTTCGTCTGGCTGCACTGATGGGCC
TGCCCGTGACCTATGTCCTGACCCATGACAGCATCGGTGTTGGCGAAGATGGCCCGACCCATGAGCCAATCGAACAGCTG
GCTATGCTGCGCTCCACGCCGAATGTCAACGTCTTCCGCCCGGCTGACGCTACGGAAACGGCCGCTGGCTGGTATCTGGC
TGTGACCAGCGAAAAGACGCCGACGGCGCTGGTGCTGACTCGTCAGAACCTGCCGCAGCTGGCGGGTTCCTCCAAGGAAG
CTCTCAAGGGTGCTTATGTGGTATCCGAAGCGAAAGATGCTGCTAATATGGACGGTATCATCATCGCTACGGGTTCTGAA
GTTTCCCTGGCAGTGGAAGCCCAGGCAAAACTGGCTGGCGAAGGCGTGGACGTTCGCGTCGTTTCCATGCCCTGCATGGA
TCTCTTCGAGCAGCAGAGTGCTGAATACAAAGCCAGCATCCTGCCGAAGAACGTCCGCGCCCGCGTAGCCGTGGAAGCTC
TCGGTGATTTCGGCTGGGGCAAATACGTTGGCCTCGATGGCGCAACGGTTTCCATGAAGGGCTTCGGCGCTTCTGCACCG
GCTGGCGTTCTCTTCGAGAAATTCGGCTTCACGGTTGACCATGTGGCTGAAGTAGTGCGCAAGGTCGTAGCTGACAACAA
ATAA

Protein sequence :
MSNIDTTCVNAIRVLAADAVQKANSGHPGLPLGSAPMAYELWANHMNHNPKNPQWANRDRFILSGGHGSTLLYSLLHYFG
YGLTMDDMKNFRQDGSLTPGHPEYGHTVGVEATTGPLGAGMGMAVGMAMAEAHLAAEFNQPGYDVVDHYTFALGGDGCMM
EGISSEAFSLAGTLGLSKLIILYDSNNISIEGSTDIAFTENVEKRMQAFGFQTLTVEDGNDLEAIGKAIEAAKADKEHPS
FITVKTQIGYGCPAKQGKASAHGEPLGVENVKALKETLGWPEPDKSFNIPQNVYDHYQELAAKGAQAEEAWNKLFADYCA
KFPELKAKWDKFHAPVDAQALLDNEEFWFYEDKAQATRAVSGTMINRLKDLLPNLFGGSADLAPSNKTDMKDAGDFSKDN
YAGRNLHFGVRELAMAAIANGITLHGGLRNYVATFFVFSDYIKPMVRLAALMGLPVTYVLTHDSIGVGEDGPTHEPIEQL
AMLRSTPNVNVFRPADATETAAGWYLAVTSEKTPTALVLTRQNLPQLAGSSKEALKGAYVVSEAKDAANMDGIIIATGSE
VSLAVEAQAKLAGEGVDVRVVSMPCMDLFEQQSAEYKASILPKNVRARVAVEALGDFGWGKYVGLDGATVSMKGFGASAP
AGVLFEKFGFTVDHVAEVVRKVVADNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 3e-137 48
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-131 48