Gene Information

Name : SELR_17410 (SELR_17410)
Accession : YP_005433472.1
Strain : Selenomonas ruminantium TAM6421
Genome accession: NC_017068
Putative virulence/resistance : Virulence
Product : putative capsular polysaccharide biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1813867 - 1814595 bp
Length : 729 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTAATATCGATTTAATTGTACATAATGATGCGAAATCGCCGATTTCCGAAGCCTATCGTGCGATTCGAACGAATCT
GCAGTTTGCCGGTGCAGGCAAGATGATCAAATTCATCAGCTTCACCTCGGCAACGCCAGGCGAAGGCAAGTCCACCACCA
TATCCAATGTGGCCATTGCCATGGCCCAGGATGGCAAGCGGGTGTTGCTGATCGATGCGGATATGCGCAAGCCGGTACAG
CATAAGAAATTCCGCCTCCAGAATAAGGGCCTTAGCAATATCATCGCCACGGGTGAATCTCTGGAGAGTATGATTCAGAA
CAATGTCATACAGAATCTGGATGTGCTGCCCAGTGGCCCGGTGCCGCCGAATCCATCGGAAATGCTGGGTTCTGAGCGGA
TGGACAATCTGCTCAAGACCGTGGGAGAGAACTACGACTATGTGTTCATCGATATGCCGCCGATCTTGGCGGTAACGGAT
GCGACCATTATCGGTACGAAGATGGATGGTGTCGTATTTGTAGTCCGTTCCGGCAAAGTTACACCGGATGAGGCCAAGGA
GGCCAAGCAGCGTCTGGTTCAGAGCCAGGTGAATATCATTGGTACAGTGCTCAACGGCGTGCCGAAGAAGAATAAAGCCG
GTTATGGTTACGGCTATGGCTATTACTATTATTACGACGAAAAGCACGAGAAACATAAAGGCAGACATAAGAGCAAACAA
AAGGATTGA

Protein sequence : 
MANIDLIVHNDAKSPISEAYRAIRTNLQFAGAGKMIKFISFTSATPGEGKSTTISNVAIAMAQDGKRVLLIDADMRKPVQ
HKKFRLQNKGLSNIIATGESLESMIQNNVIQNLDVLPSGPVPPNPSEMLGSERMDNLLKTVGENYDYVFIDMPPILAVTD
ATIIGTKMDGVVFVVRSGKVTPDEAKEAKQRLVQSQVNIIGTVLNGVPKKNKAGYGYGYGYYYYYDEKHEKHKGRHKSKQ
KD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-33 42
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SELR_17410 YP_005433472.1 putative capsular polysaccharide biosynthesis protein VFG1298 Protein 2e-31 42