|
Name : lysS (SELR_17060) Accession : YP_005433437.1 Strain : Selenomonas ruminantium TAM6421 Genome accession: NC_017068 Putative virulence/resistance : Virulence Product : putative lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1777567 - 1779081 bp Length : 1515 bp Strand : - Note : - DNA sequence : ATGGCAGAAAATAAGCAGAATCAGCAGGCTCCTGTGGAAGACCTGAATGAGATGATGAAGGTTCGCCGTGACAAGATGGA AGCCTTCAAGGAAATGGGCGTGGCTCCCTTTGGCCATCGCTTTGATGTGACGGCATATGCGGCAGATATCAAGAAGGAAT ACGACCATCTGGAAGGGGACGAAGAAGGCCCCGAAGTATTCATCGCCGGCCGCCTCATGGCTATCCGCGGCCATGGCAAG GCTTCCTTCTGCACGCTGAATGACCGCACGGGCAACATTCAGGTGTACTTCAAGATTGACGTATTGGGCGAGGAGAAGTA CAAAGGCCAGTTCCGCCGTCTTGATATCGGTGATATCATCGGCATCCGCGGCGTGGTGTTCAAGACGCACCGCGGCGAGG TTACGGTGCGTGTAGAGGACTTCGACCTGCTGTCCAAATCCCTGCGTCCGCTGCCGGAAAAATTCCATGGCCTGCAGGAC GTGGATATCCGCTATCGTCAGCGCTATCTCGACCTCATCGTGAATCAGGATGTGCGTGAGACCTTCCGCCGTCGCACGAA GACTATCAATTCCATCCGTGAATATCTGGATGAGCGCGGCTATCTGGAAGTGGAGACCCCGGTGCTGTCCACCATCGCCG GTGGCGCTGCAGCCCGTCCGTTCATCACCCACCACAACACGCTGGACATTGACCTGTACCTGCGTATCGCTACGGAACTG AACCTCAAGCGTCTGATCGTAGGCGGCCTTGACCGCGTTTATGAAATCGGCCGCATCTTCCGCAACGAGGGCATGGACGT GCGCCATAACCCGGAATTCACCTCCATCGAGTTCTATCAGGCTTTCGCTGATTACACGGATATGATGGATTTGACGGAAG GCATCGTGGTTAACGCTGCCCAGAAGGTACTGGGTACCTCCGTCATCAACTATCAGGGTGTGGAAATCGACCTGTCCAAG GTCAAGCGCATCAGCATGAACGATGCCGTCAAGGAAGCAACGGGCAAGGACTTCATGGCCTGCGAAACGGTGGAAGAAGC CCGCAAGCTGGCTGATGAAATCGGTGTTCCCTACGAGGAACGTCATGGCATCGGCGGCATCCTGAATCAGGCCTTCGAAG AAAAAGTCGAAGAGACCCTGATGCAGCCGACCTTCATCACGGGGCATCCTACGGAAATCTCCCCGTTGGCTAAGCGCAAT GCTGAAGATCCACGCATTACCGATCGCTTCGAGTTCTTCATCTATGGCCGTGAATTGGCTAATGGCTTCACCGAGCTCAA CGACCCCATCGACCAGAAGGGCCGCTTCGAGGATCAGCTCAAGCAGCGTGAAGCTGGCGATGATGAAGCCCATGGCATGG ACGAAGACTTCGTCATGGCTCTGGAATACGGCCTGCCGCCAACGGGCGGTGTAGGCATCGGCATCGACCGTCTCGTCATG TTCCTGACGGATGCTGCTTCCATTCGCGACGTACTGCTGTTCCCGACCATGAAGCCGCTGGCTGAACAAAACTAA Protein sequence : MAENKQNQQAPVEDLNEMMKVRRDKMEAFKEMGVAPFGHRFDVTAYAADIKKEYDHLEGDEEGPEVFIAGRLMAIRGHGK ASFCTLNDRTGNIQVYFKIDVLGEEKYKGQFRRLDIGDIIGIRGVVFKTHRGEVTVRVEDFDLLSKSLRPLPEKFHGLQD VDIRYRQRYLDLIVNQDVRETFRRRTKTINSIREYLDERGYLEVETPVLSTIAGGAAARPFITHHNTLDIDLYLRIATEL NLKRLIVGGLDRVYEIGRIFRNEGMDVRHNPEFTSIEFYQAFADYTDMMDLTEGIVVNAAQKVLGTSVINYQGVEIDLSK VKRISMNDAVKEATGKDFMACETVEEARKLADEIGVPYEERHGIGGILNQAFEEKVEETLMQPTFITGHPTEISPLAKRN AEDPRITDRFEFFIYGRELANGFTELNDPIDQKGRFEDQLKQREAGDDEAHGMDEDFVMALEYGLPPTGGVGIGIDRLVM FLTDAASIRDVLLFPTMKPLAEQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-103 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005433437.1 | putative lysyl-tRNA synthetase | VFG1668 | Protein | 6e-104 | 48 |
