Gene Information

Name : SELR_17010 (SELR_17010)
Accession : YP_005433432.1
Strain : Selenomonas ruminantium TAM6421
Genome accession: NC_017068
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1772511 - 1773290 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence : 
ATGACCTTAGAAACACAGAATTTGCAGGTGGCGGTCAATGGAAAAAAGATTCTGCATGATATTTCCGTGAAGTTTCCGAT
GGGCAGGCGCACGGCCATCATCGGCCCCAATGGAGCAGGCAAGTCAACCCTGCTCAAGGCGATTGCGGCGCTGAACCGGG
ATATCGAAGGACAGATCCTTTTGGATGGCCGGGATATCGCAAGCTTCGGTCGCAGGGAGCTGGCCCGTCAAATGGCGATT
TTGCCCCAGGGAACCATGGCCCCTGCCGATGTCACGGTGGAAAATCTCGTGGAGTACGGGCGCTTTCCTTACCGAAGTTT
TTTTACGCAGGACAGGGAAGCGGATCAGCGGGCGGTGAAATGGGCCATGGAAACGGCGCAGATTGCAGATTTTGCGTCCC
GACGGGTGCAGGATCTGTCAGGCGGTGAACGTCAGCGGGTGTTCCTGGCCATGGTGCTGGCCCAGCAGCCGGAGATCCTG
CTATTGGATGAGCCAACGACGTACCTGGATATTGCCAATCAATTGCAGGTGATGGATATTGTACAGGACTTGCATCGTGA
GCAGCAGATTACGGTGATCATGGTGCTGCATGATATCAACCACGCCTTGCAATATGCCGATGAGGTCATCGTGCTGCAGG
ACGGCAGAGTCCGGGCCCAGGGCGAGCCGCGGGAGGTCCTGACGGTCAAATGCCTGCGGGATATCTTCCATGTGGAAGCC
GATGTATTTGCCAATGGCAGGGGGCAGGAAATCATCTTTCCCCTGCGGAAAGTAAAATAG

Protein sequence : 
MTLETQNLQVAVNGKKILHDISVKFPMGRRTAIIGPNGAGKSTLLKAIAALNRDIEGQILLDGRDIASFGRRELARQMAI
LPQGTMAPADVTVENLVEYGRFPYRSFFTQDREADQRAVKWAMETAQIADFASRRVQDLSGGERQRVFLAMVLAQQPEIL
LLDEPTTYLDIANQLQVMDIVQDLHREQQITVIMVLHDINHALQYADEVIVLQDGRVRAQGEPREVLTVKCLRDIFHVEA
DVFANGRGQEIIFPLRKVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-49 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-45 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-45 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-45 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-45 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-47 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-49 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-49 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SELR_17010 YP_005433432.1 putative ABC transporter ATP-binding protein BAC0164 Protein 6e-50 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SELR_17010 YP_005433432.1 putative ABC transporter ATP-binding protein VFG1042 Protein 6e-50 46
SELR_17010 YP_005433432.1 putative ABC transporter ATP-binding protein VFG0925 Protein 9e-46 44