Gene Information

Name : SELR_12900 (SELR_12900)
Accession : YP_005433021.1
Strain : Selenomonas ruminantium TAM6421
Genome accession: NC_017068
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1377210 - 1378418 bp
Length : 1209 bp
Strand : -
Note : -

DNA sequence :
ATGAACGCAGTAGGGATTGATGTCTCGAAAGGCAGAAGCACAGTTGCCGTAGTAAAGCCTTTTGGTGAGACAGTAGCCAA
ACCTTTTGAGGTACGTCACACTAAAAGCGGCATGAACGACCTCGTGAATTATTTAAATACCTTAGACGGCGAATGCCGCG
TTGTCTTGGAGCACACAGGCCGCTACTACGAACCAATGGTTCGCTGGCTTTCTGGTGCCGGCCTGTTTGTTAGTGCTGTG
AACCCCAAGTTAATCAAGAACTTCGATAACAACTCCCTGCGCCGCGTCAAAACAGATAAAGCTGATGCAAAGAAGATTGC
ACGCTACGCCCTTGACAAATGGCCTGAGCTGCGTCAGTATACAGCTATGGATAAAATACGTACACAGCTCAAACTCATGA
ACCGCCAGATGAGCTTCTACCAGAAGCAGCAGACGGCATACAAAAACAATTTAATAGCCTTAGTTGATGAAACCTATCCG
GGAGCCAATAAATTCTTCACCAGCCCCAAGCGGCCAGATGGCAGCGAAAAGTGGATAGACTTCATCGAAAAATTTTGGCA
TGTGGATTGTGTTTGCAATATCAGCCTGTCTTCCTTTACAGACAAGTACCAGAAGTGGTGCAAAAAGCACGGCTATAATT
TCCAGCCTGACAAGCCAAAGGAAATACGTGATGCTTCGTTGGAACTGATTGCCATATTACCTAAAGATGATATGACGAAA
ATGTTTATCCATCAGGCTGTAGAACAGCTAAATGCCATTTCCAAGGCCGTAGAGGAACTTCGTCAACAAATGGATAGCCT
AGCTTCCAAACTGCCGGAATATCCTGTTGTTATGTCCATGTTCGGCGTAGGAACGACTCTTGGCCCACAGCTCATTGCCG
AGATTGGCGATGTGCATAAATTCACCAAGCGCAGTCAGCTTACAGCCTTTGCAGGTGTAGACCCTGGAGTTAATGAATCT
GGTGACTATGCCCAAAAGAGCGTTCACACCACTAAACATGGGTCTCCATATCTGAGAAAAACGTTATACCTCATAATGGA
TGTCTTGATTAAGCTACAACCAGAAGACGACCCTGTATACAGATTCATGGTGAAAAAACGTGATGAGGGTAAGCCCTACT
ACGTTTACATGACAGCCGGAGCAAATAAGTTCCTGCGAATCTACTTTGGTAAAGTCAAGGAATACTTAAGCAGCTTACCT
TTGGAATAA

Protein sequence :
MNAVGIDVSKGRSTVAVVKPFGETVAKPFEVRHTKSGMNDLVNYLNTLDGECRVVLEHTGRYYEPMVRWLSGAGLFVSAV
NPKLIKNFDNNSLRRVKTDKADAKKIARYALDKWPELRQYTAMDKIRTQLKLMNRQMSFYQKQQTAYKNNLIALVDETYP
GANKFFTSPKRPDGSEKWIDFIEKFWHVDCVCNISLSSFTDKYQKWCKKHGYNFQPDKPKEIRDASLELIAILPKDDMTK
MFIHQAVEQLNAISKAVEELRQQMDSLASKLPEYPVVMSMFGVGTTLGPQLIAEIGDVHKFTKRSQLTAFAGVDPGVNES
GDYAQKSVHTTKHGSPYLRKTLYLIMDVLIKLQPEDDPVYRFMVKKRDEGKPYYVYMTAGANKFLRIYFGKVKEYLSSLP
LE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00684 YP_008394208.1 IS110, transposase Not tested Not named Protein 3e-112 55