Gene Information

Name : ribD (SELR_09850)
Accession : YP_005432716.1
Strain : Selenomonas ruminantium TAM6421
Genome accession: NC_017068
Putative virulence/resistance : Unknown
Product : putative 5-amino-6-(5-phosphoribosylamino) uracil reductase / diaminohydroxyphosphoribosylaminopyrimi dine deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.193
Position : 1068954 - 1070048 bp
Length : 1095 bp
Strand : +
Note : bifunctional protein

DNA sequence :
TTGCAAGATGAAGATTTTATGCGGGTAGCGCTGAATTTAGCCCGCAATGCCACAGGGCGCACCTCGCCGAATCCTTTGGT
TGGGGCGGTGATCGTCCGAGAGGGGCGCATCGTGGGCGCTGGCTGGCATCGCAAGGCCGGCACGCCCCATGCGGAAATCC
ATGCGCTGAATATGGCGGGGGACTTAGCTAAGGGGGCCACGCTCTATGTGACGTTAGAGCCATGTTCCCACTACGGGCGC
ACGGGCCCCTGTGCGGAAGCGGTGGTGAAGGCCGGCATCAAGCGCTGTGTCATTGCCATGGGCGATCCCAATCCCAAGGT
GGCAGGCAAGGGCATTGCCATCCTGGAGCAGGCGGGCATTGAAGTGCGCTGTGGTGTGCTGGAAGCCGAAGCGATGGCCT
TGAACGAGGTGTTCCTGCACTGGATTCGCGAGAAGATGCCCTTTGTAGTGCTCAAGACCGCCATGAGCCTGGACGGCAAG
ATTGCCACCCATACGGGGAAATCCCAGTGGATAACGGGGGAAGCCGCTCGTGCGCGTGTGCATGAGTACCGTGACCTGTA
TGACGGTATTATGGTAGGCATTGGCACTGTGCTGGCCGATGATCCAAGCCTGACCACGCGTCTGCCAAATGGGACGGGCA
AGAATCCTGTGCGTATTGTCGTGGACAGTAAGGCACGTACGCCTTTGGACGCTAAGCTGGTAAATGATGGGGCGGCGCTG
ACCATCATCGCCGTGACGGAAGCCGCGCCGAAAGATCGGGTGCAGGCGCTGAAGGACAAGGGCGTGGCCATCATGATCGC
TGGCAGCGGACCGCAGGTGGATTTGCCGTTGCTGATGAAGAAGCTGGGCGAGATGGAAATCTGCTCGGTCTTTGTCGAAG
GCGGCGGCACGCTGAATTTTGCCCTGCTGCAGGCTGGGCTGGTCAGCAAGGTGCACGCCTTTATCGCCCCGAAGATTATC
GGCGGGCGGGAGGCCTTGACCTCTGTGGAGGGCGAGGGCTTTGCGCAGCTCAGCGAGGCCGTGGAACTTAATAATACCAC
TGTGGAGCAGTTAGGCGCAGATATTTTGCTGACAGGCTATGTGAAAGGACGGTGA

Protein sequence :
MQDEDFMRVALNLARNATGRTSPNPLVGAVIVREGRIVGAGWHRKAGTPHAEIHALNMAGDLAKGATLYVTLEPCSHYGR
TGPCAEAVVKAGIKRCVIAMGDPNPKVAGKGIAILEQAGIEVRCGVLEAEAMALNEVFLHWIREKMPFVVLKTAMSLDGK
IATHTGKSQWITGEAARARVHEYRDLYDGIMVGIGTVLADDPSLTTRLPNGTGKNPVRIVVDSKARTPLDAKLVNDGAAL
TIIAVTEAAPKDRVQALKDKGVAIMIAGSGPQVDLPLLMKKLGEMEICSVFVEGGGTLNFALLQAGLVSKVHAFIAPKII
GGREALTSVEGEGFAQLSEAVELNNTTVEQLGADILLTGYVKGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 5e-50 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 5e-50 41