Gene Information

Name : xerD (MARHY0941)
Accession : YP_005428846.1
Strain : Marinobacter hydrocarbonoclasticus ATCC 49840
Genome accession: NC_017067
Putative virulence/resistance : Unknown
Product : tyrosine recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 982587 - 983492 bp
Length : 906 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10361305, 10635320, 118, 20209354, 94006566, 94100681, 94222031, 9632255; Product type e : enzyme

DNA sequence :
GTGCCAAGGCCAGAAGATGAGCAGTTGATAGAGCGTTTCAGTGACGCGGTCTGGCTTGAGGATGGCCTTGGCGAGCAAAC
CCGGCAGGCCTATGCCAGTGATCTGTGCCGTTTGTCCGGGTGGCTGGAGCAGCAAGCTGGGGCGCCAACCCTGCGCAGCG
CACGACGCACAGACCTTCTGGCCTGGATGTCCCGGGGCTTGTCCGACGGCCTGAAAACCAGCACGGCGGCCCGCCGCCTG
TCTGGCGTAAGGCGCTTCTATCGTTTTCTGTTGCGTGAAGGCATTATTGCCGAAGACCCAACGTTGCGGATTGACAGCCC
TAGGTTGCCCCGGCGCTTGCCGGATACCCTGACCGAGGCCGACGTGGAGTCGCTGCTGACTGAGCCGGACCCGGAGCTGC
CGGTAGAATTGCGGGATCGGGCCATGCTGGAGATTCTCTATGGCTGCGGACTTCGGGTTTCCGAGTTGACGGGGCTGACG
GTGGACCAGGTCAACCTGAGGCAGGGCGTGGTTCGCATACAGGGCAAGGGCGGCAAGGAGCGTTTGGTGCCGCTGGGTGA
AGAAGCTGTGGACTGGTTATTACAGTATATGCGGCAGGCCCGGGGCGAGCTGCTGCGAGGCAAAACCAGTGATGCCCTGT
TTCCGGGTAATCGTGGCACCGCCATGACCCGGCAGGCCTTCTGGTATCGAATCCGGCATTATGCGATTCGCTGCGGAATC
ACCAAGCACCTTTCTCCTCATACGCTCAGGCATGCATTTGCCACCCATTTGCTCAATCACGGGGCGGATCTTCGGGTGGT
GCAGATGCTGTTGGGGCATTCAGATCTGTCGACCACCCAGATCTACACTCATGTTGCGCGGCAAAGATTGCAGGATCTTC
ATCAGGCCCACCACCCCAGGGGTTGA

Protein sequence :
MPRPEDEQLIERFSDAVWLEDGLGEQTRQAYASDLCRLSGWLEQQAGAPTLRSARRTDLLAWMSRGLSDGLKTSTAARRL
SGVRRFYRFLLREGIIAEDPTLRIDSPRLPRRLPDTLTEADVESLLTEPDPELPVELRDRAMLEILYGCGLRVSELTGLT
VDQVNLRQGVVRIQGKGGKERLVPLGEEAVDWLLQYMRQARGELLRGKTSDALFPGNRGTAMTRQAFWYRIRHYAIRCGI
TKHLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARQRLQDLHQAHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-64 49
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-64 49