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Name : dnaB (MARHY0858) Accession : YP_005428763.1 Strain : Marinobacter hydrocarbonoclasticus ATCC 49840 Genome accession: NC_017067 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : 3.6.1.- Position : 894905 - 896311 bp Length : 1407 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10404597; Product type e : enzyme DNA sequence : ATGGCCAATCCCACTCTGAAACCTGCTTCTATTGATCCGGAAACCAGTCGCATCAAGGTCCCGCCGCATTCGGTCGAGGC TGAACAGGCGGTGCTCGGCGGCCTGATGCTGGACAACCGTCGGTTTGACGAGATTGCCGAGATTATTTCAGCGGCTGATT TTTACCGGCAGGACCATCGCTTGATTTTCGGCGCCGTGGAGCGCCTGGCCAGCGAGAGCGAGCCGCTGGATGTGGTTACC CTGGCCGAGTTTCTGGAACGGGCCGGCGATATCGAGGATGCCGGTGGCCTGTCTTATCTGGCGGAACTGGCCGAGAAAAC ACCCGGCGCCGCCAACATTCGGGCCTATGCTGACATTGTTCGCGAACGCTCCATTCTGCGGCAGTTGGTAGAGGTGTCCG GCAAGATCTCCGATTCCGCCTTCAACCCGCAGGGGCGGAAAAGTAACGATATCCTGGACGAAGCCGAGCGCAGTGTGTTC CAGATTGCCGAGGCGCGTACCAAAGAGGGCTCTGGCCCCAAGGCCATTAACCCCATTCTGGCCACCACACTCAGCCGCAT TGAAGAGCTGTTTGAGTCTGGCGAGCAGACGACCGGTTTGACCACCGGATTCCGGGATCTGGACGACCAGACCTCCGGTA TGCAGCCGGCTGACCTGATCATTGTGGCGGGGCGCCCCTCCATGGGTAAGACCACCTTTGCCATGAACATCGTTGAGAAC GCGCTGATCAGCACCGGCACCCCGATACTGGTGTTCAGTATGGAGATGCCCGCAGATGCACTGGCCATGCGTATGTTGTC GTCACTCGGTCGCATTGATCAGACCAAAGTGCGGGGCGGCAAGCTGGAGGAGGATGACTGGCCCCGGCTTACTTCCGCCG TCAGTCTGTTGAAGGACAAGCCGCTTTACATCGATGACACTCCGGGCCTGAGTCCGACCGAAATGCGCTCCAGGGCCCGT CGGGTGGCCCGGGAGAACGGCGGCAAGATTGGCCTGATCATGGTCGACTATCTGCAGTTGATGCGGGTGCCGGGTAACAC CGAAGGCCGTACTGCCGAGATTTCCGAAATCTCACGCTCACTCAAGGGTATTGCCAAAGAGCTGGGCTGCCCGGTTGTGG CGCTGTCCCAGTTGAACCGGAGTCTGGAGCAGCGACCCAACAAACGCCCGGTCAACTCGGACCTGCGGGAATCCGGTGCG ATCGAGCAGGATGCCGATGTGATCATGTTCGTATACCGGGATGAGGTCTACAACGAGGATACGCCGGATAAGGGCATTGC CGAGATCATTATTGGTAAGCAGCGGAATGGCCCGATCGGTACCATCCGTCTCGCGTTCATCGGTAAATACACCAAATTCG AAGACCTGGCGCACGGCGATTACAGCGATTACGGTGGGGATTATTAA Protein sequence : MANPTLKPASIDPETSRIKVPPHSVEAEQAVLGGLMLDNRRFDEIAEIISAADFYRQDHRLIFGAVERLASESEPLDVVT LAEFLERAGDIEDAGGLSYLAELAEKTPGAANIRAYADIVRERSILRQLVEVSGKISDSAFNPQGRKSNDILDEAERSVF QIAEARTKEGSGPKAINPILATTLSRIEELFESGEQTTGLTTGFRDLDDQTSGMQPADLIIVAGRPSMGKTTFAMNIVEN ALISTGTPILVFSMEMPADALAMRMLSSLGRIDQTKVRGGKLEEDDWPRLTSAVSLLKDKPLYIDDTPGLSPTEMRSRAR RVARENGGKIGLIMVDYLQLMRVPGNTEGRTAEISEISRSLKGIAKELGCPVVALSQLNRSLEQRPNKRPVNSDLRESGA IEQDADVIMFVYRDEVYNEDTPDKGIAEIIIGKQRNGPIGTIRLAFIGKYTKFEDLAHGDYSDYGGDY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-109 | 54 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 7e-102 | 52 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-101 | 52 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-94 | 50 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-99 | 50 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-97 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-92 | 48 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-92 | 48 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 2e-81 | 44 |
